Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 COBL-210ENST00000632460 1941 ntTSL 5 BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 ANO7L1-203ENST00000602586 1720 ntBASIC10.84□□□□□ -0.67
LIMD2Q9BT23 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LIMD2Q9BT23 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.67
LIMD2Q9BT23 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 AC068880.1-201ENST00000507289 2297 ntBASIC10.83□□□□□ -0.68
LIMD2Q9BT23 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 PEX7-202ENST00000367756 680 ntTSL 3 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 NUDT16P1-203ENST00000513809 620 ntBASIC10.83□□□□□ -0.68
LIMD2Q9BT23 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 AP000692.2-201ENST00000608391 879 ntBASIC10.83□□□□□ -0.68
LIMD2Q9BT23 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 ABBA01031674.1-201ENST00000635145 728 ntBASIC10.83□□□□□ -0.68
LIMD2Q9BT23 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 CEP83-AS1-201ENST00000623122 2482 ntBASIC10.83□□□□□ -0.68
LIMD2Q9BT23 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 AC112777.1-201ENST00000540175 1423 ntBASIC10.83□□□□□ -0.68
LIMD2Q9BT23 AL512353.2-201ENST00000448759 1962 ntBASIC10.83□□□□□ -0.68
LIMD2Q9BT23 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC10.83□□□□□ -0.68
LIMD2Q9BT23 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LIMD2Q9BT23 CROCCP3-202ENST00000420820 1947 ntBASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms