Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC38A3Q99624 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC38A3Q99624 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SLC38A3Q99624 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC38A3Q99624 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC38A3Q99624 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
SLC38A3Q99624 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC38A3Q99624 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC38A3Q99624 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SLC38A3Q99624 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC38A3Q99624 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SLC38A3Q99624 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC38A3Q99624 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC38A3Q99624 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SLC38A3Q99624 EMBP1-201ENST00000458200 901 ntBASIC17.57■□□□□ 0.4
SLC38A3Q99624 AC091607.1-201ENST00000490318 1060 ntBASIC17.57■□□□□ 0.4
SLC38A3Q99624 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.57■□□□□ 0.4
SLC38A3Q99624 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.57■□□□□ 0.4
SLC38A3Q99624 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.57■□□□□ 0.4
SLC38A3Q99624 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.57■□□□□ 0.4
SLC38A3Q99624 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC38A3Q99624 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC38A3Q99624 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC38A3Q99624 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC38A3Q99624 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SLC38A3Q99624 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC38A3Q99624 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC38A3Q99624 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC38A3Q99624 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC38A3Q99624 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC38A3Q99624 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SLC38A3Q99624 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC38A3Q99624 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SLC38A3Q99624 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC38A3Q99624 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC38A3Q99624 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A3Q99624 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A3Q99624 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A3Q99624 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC38A3Q99624 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A3Q99624 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC38A3Q99624 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A3Q99624 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SLC38A3Q99624 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SLC38A3Q99624 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A3Q99624 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC38A3Q99624 NUS1P2-201ENST00000417358 873 ntBASIC17.56■□□□□ 0.4
SLC38A3Q99624 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC38A3Q99624 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC38A3Q99624 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC38A3Q99624 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SLC38A3Q99624 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC38A3Q99624 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC38A3Q99624 LINC01126-201ENST00000623515 1646 ntBASIC17.56■□□□□ 0.4
SLC38A3Q99624 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
SLC38A3Q99624 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A3Q99624 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A3Q99624 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
SLC38A3Q99624 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
SLC38A3Q99624 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A3Q99624 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A3Q99624 LETM1P2-201ENST00000597330 2178 ntBASIC17.56■□□□□ 0.4
SLC38A3Q99624 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A3Q99624 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC38A3Q99624 LINC00602-201ENST00000629776 2065 ntBASIC17.56■□□□□ 0.4
SLC38A3Q99624 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SLC38A3Q99624 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A3Q99624 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A3Q99624 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A3Q99624 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A3Q99624 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A3Q99624 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A3Q99624 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A3Q99624 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A3Q99624 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A3Q99624 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC38A3Q99624 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SLC38A3Q99624 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
SLC38A3Q99624 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A3Q99624 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A3Q99624 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.55■□□□□ 0.4
SLC38A3Q99624 KRT16P4-201ENST00000453883 522 ntBASIC17.55■□□□□ 0.4
SLC38A3Q99624 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.55■□□□□ 0.4
SLC38A3Q99624 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.55■□□□□ 0.4
SLC38A3Q99624 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC38A3Q99624 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SLC38A3Q99624 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC38A3Q99624 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC38A3Q99624 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A3Q99624 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A3Q99624 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A3Q99624 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC38A3Q99624 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC38A3Q99624 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC38A3Q99624 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC38A3Q99624 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC38A3Q99624 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC38A3Q99624 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC38A3Q99624 GMCL1P1-201ENST00000463439 1581 ntBASIC17.54■□□□□ 0.4
SLC38A3Q99624 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms