Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SCAF11Q99590 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SCAF11Q99590 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
SCAF11Q99590 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SCAF11Q99590 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC25.95■■□□□ 1.74
SCAF11Q99590 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SCAF11Q99590 AL024508.2-201ENST00000607749 1894 ntBASIC25.95■■□□□ 1.74
SCAF11Q99590 ASL-204ENST00000395331 1538 ntTSL 5 BASIC25.95■■□□□ 1.74
SCAF11Q99590 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
SCAF11Q99590 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SCAF11Q99590 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
SCAF11Q99590 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SCAF11Q99590 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC25.94■■□□□ 1.74
SCAF11Q99590 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SCAF11Q99590 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
SCAF11Q99590 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SCAF11Q99590 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
SCAF11Q99590 COBL-210ENST00000632460 1941 ntTSL 5 BASIC25.94■■□□□ 1.74
SCAF11Q99590 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SCAF11Q99590 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SCAF11Q99590 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC25.93■■□□□ 1.74
SCAF11Q99590 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SCAF11Q99590 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC25.93■■□□□ 1.74
SCAF11Q99590 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
SCAF11Q99590 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC25.93■■□□□ 1.74
SCAF11Q99590 ETFA-208ENST00000559602 792 ntTSL 3 BASIC25.93■■□□□ 1.74
SCAF11Q99590 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC25.93■■□□□ 1.74
SCAF11Q99590 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC25.93■■□□□ 1.74
SCAF11Q99590 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
SCAF11Q99590 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SCAF11Q99590 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SCAF11Q99590 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SCAF11Q99590 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SCAF11Q99590 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SCAF11Q99590 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SCAF11Q99590 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC25.93■■□□□ 1.74
SCAF11Q99590 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC25.93■■□□□ 1.74
SCAF11Q99590 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC25.92■■□□□ 1.74
SCAF11Q99590 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC25.92■■□□□ 1.74
SCAF11Q99590 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC25.92■■□□□ 1.74
SCAF11Q99590 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC25.92■■□□□ 1.74
SCAF11Q99590 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC25.92■■□□□ 1.74
SCAF11Q99590 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC25.92■■□□□ 1.74
SCAF11Q99590 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC25.92■■□□□ 1.74
SCAF11Q99590 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC25.92■■□□□ 1.74
SCAF11Q99590 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC25.92■■□□□ 1.74
SCAF11Q99590 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC25.92■■□□□ 1.74
SCAF11Q99590 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SCAF11Q99590 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC25.92■■□□□ 1.74
SCAF11Q99590 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC25.92■■□□□ 1.74
SCAF11Q99590 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SCAF11Q99590 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SCAF11Q99590 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
SCAF11Q99590 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC25.92■■□□□ 1.74
SCAF11Q99590 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC25.92■■□□□ 1.74
SCAF11Q99590 SOD2-201ENST00000337404 991 ntTSL 2 BASIC25.91■■□□□ 1.74
SCAF11Q99590 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
SCAF11Q99590 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC25.91■■□□□ 1.74
SCAF11Q99590 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
SCAF11Q99590 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SCAF11Q99590 AL499627.1-201ENST00000569373 2188 ntBASIC25.91■■□□□ 1.74
SCAF11Q99590 AC009102.3-201ENST00000623118 1491 ntBASIC25.91■■□□□ 1.74
SCAF11Q99590 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
SCAF11Q99590 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SCAF11Q99590 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC25.91■■□□□ 1.74
SCAF11Q99590 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SCAF11Q99590 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SCAF11Q99590 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC25.91■■□□□ 1.74
SCAF11Q99590 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SCAF11Q99590 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
SCAF11Q99590 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SCAF11Q99590 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SCAF11Q99590 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC25.91■■□□□ 1.74
SCAF11Q99590 PON3-203ENST00000427422 894 ntTSL 3 BASIC25.91■■□□□ 1.74
SCAF11Q99590 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
SCAF11Q99590 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC25.91■■□□□ 1.74
SCAF11Q99590 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC25.91■■□□□ 1.74
SCAF11Q99590 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SCAF11Q99590 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SCAF11Q99590 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SCAF11Q99590 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC25.9■■□□□ 1.74
SCAF11Q99590 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
SCAF11Q99590 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC25.9■■□□□ 1.74
SCAF11Q99590 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
SCAF11Q99590 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC25.9■■□□□ 1.74
SCAF11Q99590 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
SCAF11Q99590 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SCAF11Q99590 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC25.9■■□□□ 1.74
SCAF11Q99590 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC25.9■■□□□ 1.74
SCAF11Q99590 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC25.9■■□□□ 1.74
SCAF11Q99590 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SCAF11Q99590 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SCAF11Q99590 AC254562.1-201ENST00000417586 456 ntBASIC25.9■■□□□ 1.74
SCAF11Q99590 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC25.9■■□□□ 1.74
SCAF11Q99590 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC25.9■■□□□ 1.74
SCAF11Q99590 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC25.9■■□□□ 1.74
SCAF11Q99590 MSRA-206ENST00000521209 814 ntTSL 3 BASIC25.9■■□□□ 1.74
SCAF11Q99590 COX5A-206ENST00000568783 571 ntTSL 3 BASIC25.9■■□□□ 1.74
SCAF11Q99590 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC25.9■■□□□ 1.74
SCAF11Q99590 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC25.89■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms