Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMCN1Q96RW7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC5.49□□□□□ -1.53
HMCN1Q96RW7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMCN1Q96RW7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
HMCN1Q96RW7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
HMCN1Q96RW7 RBPMS2P1-201ENST00000437762 623 ntBASIC5.49□□□□□ -1.53
HMCN1Q96RW7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
HMCN1Q96RW7 AL512638.1-201ENST00000457493 794 ntBASIC5.49□□□□□ -1.53
HMCN1Q96RW7 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC5.49□□□□□ -1.53
HMCN1Q96RW7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC5.49□□□□□ -1.53
HMCN1Q96RW7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC5.49□□□□□ -1.53
HMCN1Q96RW7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC5.49□□□□□ -1.53
HMCN1Q96RW7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC5.49□□□□□ -1.53
HMCN1Q96RW7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HMCN1Q96RW7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 AC092720.2-201ENST00000602388 1665 ntBASIC5.48□□□□□ -1.53
HMCN1Q96RW7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 AC098614.1-201ENST00000368528 745 ntBASIC5.48□□□□□ -1.53
HMCN1Q96RW7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC5.48□□□□□ -1.53
HMCN1Q96RW7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 AC112191.1-201ENST00000523689 701 ntBASIC5.48□□□□□ -1.53
HMCN1Q96RW7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 AC104457.1-201ENST00000401024 814 ntBASIC5.48□□□□□ -1.53
HMCN1Q96RW7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 AC004790.2-201ENST00000623588 572 ntBASIC5.48□□□□□ -1.53
HMCN1Q96RW7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC5.48□□□□□ -1.53
HMCN1Q96RW7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMCN1Q96RW7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms