Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 POM121L13P-201ENST00000422362 380 ntBASIC13.9□□□□□ -0.18
LINC00479Q96M42 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00479Q96M42 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC00479Q96M42 TSPY6P-201ENST00000448518 926 ntBASIC13.9□□□□□ -0.18
LINC00479Q96M42 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.9□□□□□ -0.18
LINC00479Q96M42 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LINC00479Q96M42 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00479Q96M42 AC098934.4-201ENST00000564127 592 ntBASIC13.9□□□□□ -0.18
LINC00479Q96M42 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00479Q96M42 AL137784.2-201ENST00000607332 1000 ntBASIC13.9□□□□□ -0.18
LINC00479Q96M42 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC00479Q96M42 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00479Q96M42 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00479Q96M42 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00479Q96M42 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00479Q96M42 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00479Q96M42 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC00479Q96M42 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00479Q96M42 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00479Q96M42 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LINC00479Q96M42 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC00479Q96M42 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.9□□□□□ -0.19
LINC00479Q96M42 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
LINC00479Q96M42 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
LINC00479Q96M42 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
LINC00479Q96M42 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00479Q96M42 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LINC00479Q96M42 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00479Q96M42 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00479Q96M42 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LINC00479Q96M42 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC00479Q96M42 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LINC00479Q96M42 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00479Q96M42 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00479Q96M42 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00479Q96M42 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00479Q96M42 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00479Q96M42 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC13.89□□□□□ -0.19
LINC00479Q96M42 GLI3-203ENST00000437480 451 ntTSL 2 BASIC13.89□□□□□ -0.19
LINC00479Q96M42 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00479Q96M42 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LINC00479Q96M42 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00479Q96M42 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00479Q96M42 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00479Q96M42 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00479Q96M42 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
LINC00479Q96M42 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.88□□□□□ -0.19
LINC00479Q96M42 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00479Q96M42 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00479Q96M42 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00479Q96M42 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00479Q96M42 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC00479Q96M42 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00479Q96M42 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00479Q96M42 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00479Q96M42 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LINC00479Q96M42 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC00479Q96M42 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LINC00479Q96M42 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00479Q96M42 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
LINC00479Q96M42 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC00479Q96M42 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00479Q96M42 DERL1-203ENST00000419562 918 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC00479Q96M42 PTPA-216ENST00000432651 857 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC00479Q96M42 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.88□□□□□ -0.19
LINC00479Q96M42 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00479Q96M42 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00479Q96M42 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC13.88□□□□□ -0.19
LINC00479Q96M42 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC00479Q96M42 PFKL-212ENST00000628044 129 ntTSL 3 BASIC13.88□□□□□ -0.19
LINC00479Q96M42 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.88□□□□□ -0.19
LINC00479Q96M42 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00479Q96M42 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.88□□□□□ -0.19
LINC00479Q96M42 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00479Q96M42 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00479Q96M42 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LINC00479Q96M42 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.88□□□□□ -0.19
LINC00479Q96M42 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00479Q96M42 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00479Q96M42 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LINC00479Q96M42 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LINC00479Q96M42 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00479Q96M42 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00479Q96M42 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00479Q96M42 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LINC00479Q96M42 AL355312.1-201ENST00000407115 2176 ntBASIC13.88□□□□□ -0.19
LINC00479Q96M42 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LINC00479Q96M42 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00479Q96M42 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LINC00479Q96M42 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00479Q96M42 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00479Q96M42 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00479Q96M42 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LINC00479Q96M42 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.87□□□□□ -0.19
LINC00479Q96M42 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.87□□□□□ -0.19
LINC00479Q96M42 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LINC00479Q96M42 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00479Q96M42 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LINC00479Q96M42 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LINC00479Q96M42 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms