Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDLIM5Q96HC4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 AC211429.1-201ENST00000415277 523 ntBASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 AL136038.4-201ENST00000603606 1261 ntBASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 AC139887.4-201ENST00000607877 719 ntBASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PDLIM5Q96HC4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 LTB4R2-202ENST00000528054 3092 ntBASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 AC005521.1-201ENST00000393351 872 ntBASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PDLIM5Q96HC4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDLIM5Q96HC4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms