Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 RASA4CP-201ENST00000424092 1398 ntBASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 PHGDH-209ENST00000641074 1780 ntBASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHCHD1Q96BP2 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 PCDHB17P-201ENST00000539533 2393 ntBASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 RARRES2P4-201ENST00000514074 484 ntBASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 AC063926.3-201ENST00000624734 5658 ntBASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHCHD1Q96BP2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 AC007322.4-201ENST00000509611 723 ntBASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms