Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
SH3RF3Q8TEJ3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.48■■□□□ 1.03
SH3RF3Q8TEJ3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.48■■□□□ 1.03
SH3RF3Q8TEJ3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.48■■□□□ 1.03
SH3RF3Q8TEJ3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SH3RF3Q8TEJ3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.48■■□□□ 1.03
SH3RF3Q8TEJ3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SH3RF3Q8TEJ3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SH3RF3Q8TEJ3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.48■■□□□ 1.03
SH3RF3Q8TEJ3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.48■■□□□ 1.03
SH3RF3Q8TEJ3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SH3RF3Q8TEJ3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SH3RF3Q8TEJ3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SH3RF3Q8TEJ3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SH3RF3Q8TEJ3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.48■■□□□ 1.03
SH3RF3Q8TEJ3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SH3RF3Q8TEJ3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SH3RF3Q8TEJ3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SH3RF3Q8TEJ3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.48■■□□□ 1.03
SH3RF3Q8TEJ3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.48■■□□□ 1.03
SH3RF3Q8TEJ3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
SH3RF3Q8TEJ3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SH3RF3Q8TEJ3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SH3RF3Q8TEJ3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SH3RF3Q8TEJ3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.48■■□□□ 1.03
SH3RF3Q8TEJ3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 AC079776.4-201ENST00000511039 504 ntBASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 AC008608.2-201ENST00000606089 416 ntBASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 AP001269.4-201ENST00000609611 512 ntBASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 HLA-A-201ENST00000376802 1334 ntBASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 AC093010.1-201ENST00000473625 1624 ntBASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SH3RF3Q8TEJ3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3RF3Q8TEJ3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.03
SH3RF3Q8TEJ3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 FAM197Y8-203ENST00000450145 560 ntBASIC21.45■■□□□ 1.02
SH3RF3Q8TEJ3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms