Protein–RNA interactions for Protein: Q8TDM0

BCAS4, Breast carcinoma-amplified sequence 4, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4Q8TDM0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 PCDHB17P-201ENST00000539533 2393 ntBASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BCAS4Q8TDM0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
BCAS4Q8TDM0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BCAS4Q8TDM0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BCAS4Q8TDM0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BCAS4Q8TDM0 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
BCAS4Q8TDM0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BCAS4Q8TDM0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BCAS4Q8TDM0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.27■□□□□ 0.51
BCAS4Q8TDM0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 KRT18P16-201ENST00000510337 1294 ntBASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.26■□□□□ 0.51
BCAS4Q8TDM0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
BCAS4Q8TDM0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BCAS4Q8TDM0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BCAS4Q8TDM0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.25■□□□□ 0.51
BCAS4Q8TDM0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.25■□□□□ 0.51
BCAS4Q8TDM0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
BCAS4Q8TDM0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BCAS4Q8TDM0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
BCAS4Q8TDM0 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BCAS4Q8TDM0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BCAS4Q8TDM0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
BCAS4Q8TDM0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BCAS4Q8TDM0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.25■□□□□ 0.51
BCAS4Q8TDM0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
BCAS4Q8TDM0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
BCAS4Q8TDM0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.25■□□□□ 0.51
BCAS4Q8TDM0 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BCAS4Q8TDM0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BCAS4Q8TDM0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BCAS4Q8TDM0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
BCAS4Q8TDM0 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BCAS4Q8TDM0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BCAS4Q8TDM0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
BCAS4Q8TDM0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
BCAS4Q8TDM0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BCAS4Q8TDM0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BCAS4Q8TDM0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.24■□□□□ 0.51
BCAS4Q8TDM0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
BCAS4Q8TDM0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BCAS4Q8TDM0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.24■□□□□ 0.51
BCAS4Q8TDM0 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
BCAS4Q8TDM0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
BCAS4Q8TDM0 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
BCAS4Q8TDM0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BCAS4Q8TDM0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BCAS4Q8TDM0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BCAS4Q8TDM0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
BCAS4Q8TDM0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BCAS4Q8TDM0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.24■□□□□ 0.51
BCAS4Q8TDM0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BCAS4Q8TDM0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BCAS4Q8TDM0 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.24■□□□□ 0.51
BCAS4Q8TDM0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.24■□□□□ 0.51
BCAS4Q8TDM0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
BCAS4Q8TDM0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BCAS4Q8TDM0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.23■□□□□ 0.51
BCAS4Q8TDM0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
BCAS4Q8TDM0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BCAS4Q8TDM0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BCAS4Q8TDM0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
BCAS4Q8TDM0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms