Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 AC004980.1-204ENST00000429707 299 ntBASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 KRT16P5-201ENST00000455284 522 ntBASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 KRT18P55-202ENST00000578578 1546 ntBASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RAB3IL1Q8TBN0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB3IL1Q8TBN0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB3IL1Q8TBN0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB3IL1Q8TBN0 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB3IL1Q8TBN0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.11■□□□□ 0.49
RAB3IL1Q8TBN0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB3IL1Q8TBN0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.11■□□□□ 0.49
RAB3IL1Q8TBN0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.11■□□□□ 0.49
RAB3IL1Q8TBN0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.11■□□□□ 0.49
RAB3IL1Q8TBN0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.11■□□□□ 0.49
RAB3IL1Q8TBN0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.11■□□□□ 0.49
RAB3IL1Q8TBN0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.11■□□□□ 0.49
RAB3IL1Q8TBN0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RAB3IL1Q8TBN0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB3IL1Q8TBN0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.11■□□□□ 0.49
RAB3IL1Q8TBN0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB3IL1Q8TBN0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RAB3IL1Q8TBN0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAB3IL1Q8TBN0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB3IL1Q8TBN0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RAB3IL1Q8TBN0 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB3IL1Q8TBN0 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB3IL1Q8TBN0 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAB3IL1Q8TBN0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 MIR564-202ENST00000385049 94 ntBASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 AC091390.4-202ENST00000476426 537 ntBASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 CKBP1-201ENST00000565489 1086 ntBASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 MIR4651-201ENST00000582622 73 ntBASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 MTDHP1-201ENST00000605323 784 ntBASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RAB3IL1Q8TBN0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAB3IL1Q8TBN0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms