Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 PVRIG2P-201ENST00000435460 978 ntBASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 AC092647.4-201ENST00000457211 535 ntBASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HMGCLL1Q8TB92 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 KRT18P38-201ENST00000449496 1282 ntBASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 AL590326.2-201ENST00000625139 305 ntBASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 AL645608.8-201ENST00000606034 2086 ntBASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.81■□□□□ 0.44
HMGCLL1Q8TB92 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLL1Q8TB92 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.8■□□□□ 0.44
HMGCLL1Q8TB92 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLL1Q8TB92 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLL1Q8TB92 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.8■□□□□ 0.44
HMGCLL1Q8TB92 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.8■□□□□ 0.44
HMGCLL1Q8TB92 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.8■□□□□ 0.44
HMGCLL1Q8TB92 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLL1Q8TB92 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.8■□□□□ 0.44
HMGCLL1Q8TB92 AC012313.1-201ENST00000593393 3059 ntBASIC17.8■□□□□ 0.44
HMGCLL1Q8TB92 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLL1Q8TB92 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.8■□□□□ 0.44
HMGCLL1Q8TB92 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
HMGCLL1Q8TB92 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.8■□□□□ 0.44
HMGCLL1Q8TB92 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLL1Q8TB92 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.8■□□□□ 0.44
HMGCLL1Q8TB92 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGCLL1Q8TB92 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.8■□□□□ 0.44
HMGCLL1Q8TB92 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.8■□□□□ 0.44
HMGCLL1Q8TB92 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 SDHAP2-201ENST00000455183 2001 ntBASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 HYMAI.1-201ENST00000620949 238 ntBASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HMGCLL1Q8TB92 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms