Protein–RNA interactions for Protein: Q8NE62

CHDH, Choline dehydrogenase, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHDHQ8NE62 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHDHQ8NE62 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHDHQ8NE62 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHDHQ8NE62 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHDHQ8NE62 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.21■□□□□ 0.35
CHDHQ8NE62 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHDHQ8NE62 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.21■□□□□ 0.35
CHDHQ8NE62 MIR1238-201ENST00000408483 83 ntBASIC17.21■□□□□ 0.35
CHDHQ8NE62 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.21■□□□□ 0.35
CHDHQ8NE62 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
CHDHQ8NE62 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.21■□□□□ 0.35
CHDHQ8NE62 AL390955.1-201ENST00000428694 934 ntBASIC17.21■□□□□ 0.35
CHDHQ8NE62 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.21■□□□□ 0.35
CHDHQ8NE62 CCR12P-201ENST00000446203 998 ntBASIC17.21■□□□□ 0.35
CHDHQ8NE62 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.21■□□□□ 0.35
CHDHQ8NE62 AP003041.3-201ENST00000527151 707 ntBASIC17.21■□□□□ 0.35
CHDHQ8NE62 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.21■□□□□ 0.35
CHDHQ8NE62 AC087388.1-201ENST00000571370 1112 ntBASIC17.21■□□□□ 0.35
CHDHQ8NE62 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.21■□□□□ 0.35
CHDHQ8NE62 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.21■□□□□ 0.35
CHDHQ8NE62 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.21■□□□□ 0.35
CHDHQ8NE62 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.21■□□□□ 0.35
CHDHQ8NE62 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHDHQ8NE62 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHDHQ8NE62 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CHDHQ8NE62 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHDHQ8NE62 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.21■□□□□ 0.35
CHDHQ8NE62 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CHDHQ8NE62 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHDHQ8NE62 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.21■□□□□ 0.34
CHDHQ8NE62 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
CHDHQ8NE62 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
CHDHQ8NE62 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.21■□□□□ 0.34
CHDHQ8NE62 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.2■□□□□ 0.34
CHDHQ8NE62 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHDHQ8NE62 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CHDHQ8NE62 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHDHQ8NE62 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHDHQ8NE62 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHDHQ8NE62 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHDHQ8NE62 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.2■□□□□ 0.34
CHDHQ8NE62 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.2■□□□□ 0.34
CHDHQ8NE62 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHDHQ8NE62 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.2■□□□□ 0.34
CHDHQ8NE62 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHDHQ8NE62 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHDHQ8NE62 AC138028.4-201ENST00000564984 1845 ntBASIC17.2■□□□□ 0.34
CHDHQ8NE62 AL137013.1-201ENST00000432946 1228 ntBASIC17.2■□□□□ 0.34
CHDHQ8NE62 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.2■□□□□ 0.34
CHDHQ8NE62 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.2■□□□□ 0.34
CHDHQ8NE62 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.2■□□□□ 0.34
CHDHQ8NE62 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CHDHQ8NE62 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.2■□□□□ 0.34
CHDHQ8NE62 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
CHDHQ8NE62 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHDHQ8NE62 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CHDHQ8NE62 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHDHQ8NE62 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CHDHQ8NE62 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHDHQ8NE62 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CHDHQ8NE62 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CHDHQ8NE62 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.2■□□□□ 0.34
CHDHQ8NE62 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.2■□□□□ 0.34
CHDHQ8NE62 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHDHQ8NE62 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CHDHQ8NE62 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CHDHQ8NE62 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHDHQ8NE62 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHDHQ8NE62 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHDHQ8NE62 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CHDHQ8NE62 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHDHQ8NE62 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHDHQ8NE62 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.19■□□□□ 0.34
CHDHQ8NE62 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CHDHQ8NE62 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHDHQ8NE62 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHDHQ8NE62 TSPY14P-201ENST00000303979 915 ntBASIC17.19■□□□□ 0.34
CHDHQ8NE62 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHDHQ8NE62 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHDHQ8NE62 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.19■□□□□ 0.34
CHDHQ8NE62 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHDHQ8NE62 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.19■□□□□ 0.34
CHDHQ8NE62 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.19■□□□□ 0.34
CHDHQ8NE62 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHDHQ8NE62 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
CHDHQ8NE62 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.19■□□□□ 0.34
CHDHQ8NE62 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.19■□□□□ 0.34
CHDHQ8NE62 C2orf69P3-201ENST00000565542 1120 ntBASIC17.19■□□□□ 0.34
CHDHQ8NE62 WWOX-216ENST00000569818 525 ntBASIC17.19■□□□□ 0.34
CHDHQ8NE62 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.19■□□□□ 0.34
CHDHQ8NE62 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHDHQ8NE62 AC116562.4-202ENST00000641738 218 ntBASIC17.19■□□□□ 0.34
CHDHQ8NE62 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHDHQ8NE62 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHDHQ8NE62 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CHDHQ8NE62 KRT8P50-201ENST00000562022 1438 ntBASIC17.19■□□□□ 0.34
CHDHQ8NE62 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CHDHQ8NE62 TNRC18P3-201ENST00000441896 2691 ntBASIC17.19■□□□□ 0.34
CHDHQ8NE62 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHDHQ8NE62 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms