Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
CFAP43Q8NDM7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
CFAP43Q8NDM7 AP002414.3-201ENST00000589352 1468 ntBASIC28.22■■■□□ 2.11
CFAP43Q8NDM7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CFAP43Q8NDM7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC28.22■■■□□ 2.11
CFAP43Q8NDM7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC28.22■■■□□ 2.11
CFAP43Q8NDM7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
CFAP43Q8NDM7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CFAP43Q8NDM7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC28.22■■■□□ 2.11
CFAP43Q8NDM7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CFAP43Q8NDM7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CFAP43Q8NDM7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CFAP43Q8NDM7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC28.21■■■□□ 2.11
CFAP43Q8NDM7 AC073592.3-201ENST00000625118 1834 ntBASIC28.21■■■□□ 2.11
CFAP43Q8NDM7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CFAP43Q8NDM7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC28.21■■■□□ 2.11
CFAP43Q8NDM7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CFAP43Q8NDM7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC28.21■■■□□ 2.11
CFAP43Q8NDM7 YBX1P5-201ENST00000509441 847 ntBASIC28.21■■■□□ 2.11
CFAP43Q8NDM7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC28.21■■■□□ 2.11
CFAP43Q8NDM7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CFAP43Q8NDM7 AC107918.4-202ENST00000641623 219 ntBASIC28.21■■■□□ 2.11
CFAP43Q8NDM7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CFAP43Q8NDM7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CFAP43Q8NDM7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC28.21■■■□□ 2.11
CFAP43Q8NDM7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CFAP43Q8NDM7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
CFAP43Q8NDM7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
CFAP43Q8NDM7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CFAP43Q8NDM7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
CFAP43Q8NDM7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
CFAP43Q8NDM7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC28.2■■■□□ 2.11
CFAP43Q8NDM7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC28.2■■■□□ 2.11
CFAP43Q8NDM7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
CFAP43Q8NDM7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC28.2■■■□□ 2.1
CFAP43Q8NDM7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CFAP43Q8NDM7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CFAP43Q8NDM7 AL356309.3-201ENST00000624132 1934 ntBASIC28.2■■■□□ 2.1
CFAP43Q8NDM7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CFAP43Q8NDM7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
CFAP43Q8NDM7 CALY-203ENST00000368558 825 ntTSL 5 BASIC28.19■■■□□ 2.1
CFAP43Q8NDM7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC28.19■■■□□ 2.1
CFAP43Q8NDM7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC28.19■■■□□ 2.1
CFAP43Q8NDM7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CFAP43Q8NDM7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CFAP43Q8NDM7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC28.19■■■□□ 2.1
CFAP43Q8NDM7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CFAP43Q8NDM7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC28.19■■■□□ 2.1
CFAP43Q8NDM7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CFAP43Q8NDM7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CFAP43Q8NDM7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CFAP43Q8NDM7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CFAP43Q8NDM7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC28.19■■■□□ 2.1
CFAP43Q8NDM7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CFAP43Q8NDM7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
CFAP43Q8NDM7 AL035633.1-201ENST00000406139 838 ntBASIC28.19■■■□□ 2.1
CFAP43Q8NDM7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
CFAP43Q8NDM7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC28.19■■■□□ 2.1
CFAP43Q8NDM7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CFAP43Q8NDM7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
CFAP43Q8NDM7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CFAP43Q8NDM7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CFAP43Q8NDM7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC28.18■■■□□ 2.1
CFAP43Q8NDM7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC28.18■■■□□ 2.1
CFAP43Q8NDM7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
CFAP43Q8NDM7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC28.18■■■□□ 2.1
CFAP43Q8NDM7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC28.18■■■□□ 2.1
CFAP43Q8NDM7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CFAP43Q8NDM7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC28.18■■■□□ 2.1
CFAP43Q8NDM7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC28.18■■■□□ 2.1
CFAP43Q8NDM7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC28.18■■■□□ 2.1
CFAP43Q8NDM7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC28.18■■■□□ 2.1
CFAP43Q8NDM7 MTDHP5-201ENST00000598980 586 ntBASIC28.18■■■□□ 2.1
CFAP43Q8NDM7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC28.18■■■□□ 2.1
CFAP43Q8NDM7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC28.18■■■□□ 2.1
CFAP43Q8NDM7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
CFAP43Q8NDM7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
CFAP43Q8NDM7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
CFAP43Q8NDM7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
CFAP43Q8NDM7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC28.18■■■□□ 2.1
CFAP43Q8NDM7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC28.18■■■□□ 2.1
CFAP43Q8NDM7 AC009947.1-201ENST00000444350 727 ntBASIC28.17■■■□□ 2.1
CFAP43Q8NDM7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC28.17■■■□□ 2.1
CFAP43Q8NDM7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC28.17■■■□□ 2.1
CFAP43Q8NDM7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CFAP43Q8NDM7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CFAP43Q8NDM7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CFAP43Q8NDM7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CFAP43Q8NDM7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CFAP43Q8NDM7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CFAP43Q8NDM7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC28.17■■■□□ 2.1
CFAP43Q8NDM7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CFAP43Q8NDM7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
CFAP43Q8NDM7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC28.17■■■□□ 2.1
CFAP43Q8NDM7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
CFAP43Q8NDM7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC28.17■■■□□ 2.1
CFAP43Q8NDM7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC28.16■■■□□ 2.1
CFAP43Q8NDM7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC28.16■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms