Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.68■□□□□ 0.58
CDKL3Q8IVW4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKL3Q8IVW4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.68■□□□□ 0.58
CDKL3Q8IVW4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.68■□□□□ 0.58
CDKL3Q8IVW4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKL3Q8IVW4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDKL3Q8IVW4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 AC008687.5-201ENST00000593746 558 ntBASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 AC134043.2-201ENST00000624206 2238 ntBASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL3Q8IVW4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL3Q8IVW4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 AC066615.1-201ENST00000640911 628 ntBASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CDKL3Q8IVW4 KRT18P55-202ENST00000578578 1546 ntBASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms