Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 HYMAI-201ENST00000635591 3347 ntBASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 AC131212.1-201ENST00000613771 668 ntBASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 TSPY21P-201ENST00000433481 731 ntBASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 AC023824.1-201ENST00000562945 2975 ntBASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 AC008694.1-202ENST00000636953 945 ntBASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CROCCP3Q8IVE0 TSPY26P-202ENST00000565928 3884 ntBASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 AL390719.1-204ENST00000412397 1219 ntBASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 AC073210.2-201ENST00000430369 194 ntBASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CROCCP3Q8IVE0 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms