Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAB11FIP4Q86YS3 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.31■■□□□ 1
RAB11FIP4Q86YS3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.31■■□□□ 1
RAB11FIP4Q86YS3 AC010331.1-201ENST00000611423 582 ntBASIC21.31■■□□□ 1
RAB11FIP4Q86YS3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
RAB11FIP4Q86YS3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB11FIP4Q86YS3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB11FIP4Q86YS3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAB11FIP4Q86YS3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB11FIP4Q86YS3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RAB11FIP4Q86YS3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB11FIP4Q86YS3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB11FIP4Q86YS3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB11FIP4Q86YS3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.31■■□□□ 1
RAB11FIP4Q86YS3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
RAB11FIP4Q86YS3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAB11FIP4Q86YS3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RAB11FIP4Q86YS3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.3■■□□□ 1
RAB11FIP4Q86YS3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.3■■□□□ 1
RAB11FIP4Q86YS3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAB11FIP4Q86YS3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RAB11FIP4Q86YS3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAB11FIP4Q86YS3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAB11FIP4Q86YS3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
RAB11FIP4Q86YS3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.3■■□□□ 1
RAB11FIP4Q86YS3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAB11FIP4Q86YS3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAB11FIP4Q86YS3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.3■■□□□ 1
RAB11FIP4Q86YS3 KRT18P35-201ENST00000510488 1269 ntBASIC21.3■■□□□ 1
RAB11FIP4Q86YS3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.3■■□□□ 1
RAB11FIP4Q86YS3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.3■■□□□ 1
RAB11FIP4Q86YS3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.3■■□□□ 1
RAB11FIP4Q86YS3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAB11FIP4Q86YS3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
RAB11FIP4Q86YS3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RAB11FIP4Q86YS3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAB11FIP4Q86YS3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAB11FIP4Q86YS3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAB11FIP4Q86YS3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 AP000997.3-201ENST00000623333 2250 ntBASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 AL031133.1-201ENST00000406807 723 ntBASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 AL445228.2-201ENST00000605589 952 ntBASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB11FIP4Q86YS3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 RNF126P1-202ENST00000569893 925 ntBASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 AC132938.6-201ENST00000623828 1655 ntBASIC21.28■■□□□ 1
RAB11FIP4Q86YS3 AL162741.1-201ENST00000565563 1558 ntBASIC21.27■■□□□ 1
RAB11FIP4Q86YS3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAB11FIP4Q86YS3 LINC00602-201ENST00000629776 2065 ntBASIC21.27■■□□□ 1
RAB11FIP4Q86YS3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.27■■□□□ 1
RAB11FIP4Q86YS3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAB11FIP4Q86YS3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAB11FIP4Q86YS3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAB11FIP4Q86YS3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
RAB11FIP4Q86YS3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms