Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC25Q86WR0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC25Q86WR0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC25Q86WR0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC25Q86WR0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC25Q86WR0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC25Q86WR0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC25Q86WR0 MIR564-202ENST00000385049 94 ntBASIC18.77■□□□□ 0.6
CCDC25Q86WR0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC25Q86WR0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC25Q86WR0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
CCDC25Q86WR0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.77■□□□□ 0.6
CCDC25Q86WR0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC25Q86WR0 AL031985.4-201ENST00000642138 673 ntBASIC18.77■□□□□ 0.6
CCDC25Q86WR0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC25Q86WR0 SIRPAP1-201ENST00000448467 1770 ntBASIC18.77■□□□□ 0.6
CCDC25Q86WR0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC25Q86WR0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC25Q86WR0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC25Q86WR0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CCDC25Q86WR0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC25Q86WR0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC25Q86WR0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.77■□□□□ 0.59
CCDC25Q86WR0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CCDC25Q86WR0 AC108860.2-201ENST00000562760 2183 ntBASIC18.76■□□□□ 0.59
CCDC25Q86WR0 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC25Q86WR0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC25Q86WR0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC25Q86WR0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CCDC25Q86WR0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC25Q86WR0 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.76■□□□□ 0.59
CCDC25Q86WR0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
CCDC25Q86WR0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC25Q86WR0 AC133681.1-201ENST00000465482 601 ntBASIC18.76■□□□□ 0.59
CCDC25Q86WR0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC25Q86WR0 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.76■□□□□ 0.59
CCDC25Q86WR0 AL353708.3-201ENST00000610272 989 ntBASIC18.76■□□□□ 0.59
CCDC25Q86WR0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC25Q86WR0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC25Q86WR0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC25Q86WR0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
CCDC25Q86WR0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC25Q86WR0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC25Q86WR0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC25Q86WR0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC25Q86WR0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC25Q86WR0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC25Q86WR0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC25Q86WR0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC25Q86WR0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC25Q86WR0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 KRT8P50-201ENST00000562022 1438 ntBASIC18.75■□□□□ 0.59
CCDC25Q86WR0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC25Q86WR0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC25Q86WR0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms