Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 AC244107.1-201ENST00000442033 332 ntBASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 KRT18P28-201ENST00000453838 1332 ntBASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 AL096865.1-201ENST00000606796 927 ntBASIC11.15□□□□□ -0.62
VPS13BQ7Z7G8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC11.15□□□□□ -0.63
VPS13BQ7Z7G8 HLA-J-201ENST00000462773 1622 ntBASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 AC092910.1-201ENST00000482027 1129 ntBASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 AC132938.6-201ENST00000623828 1655 ntBASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 AC009102.3-201ENST00000623118 1491 ntBASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 LAGE3P1-201ENST00000425356 484 ntBASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 AC068472.1-201ENST00000474589 881 ntBASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 AL513190.1-201ENST00000621254 727 ntBASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
VPS13BQ7Z7G8 AC116562.4-201ENST00000641316 2276 ntBASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 AC239800.4-201ENST00000603712 296 ntBASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC11.13□□□□□ -0.63
VPS13BQ7Z7G8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms