Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD3Q7Z3D4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD3Q7Z3D4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LYSMD3Q7Z3D4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LYSMD3Q7Z3D4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD3Q7Z3D4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
LYSMD3Q7Z3D4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD3Q7Z3D4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD3Q7Z3D4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD3Q7Z3D4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.24■□□□□ 0.51
LYSMD3Q7Z3D4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.24■□□□□ 0.51
LYSMD3Q7Z3D4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
LYSMD3Q7Z3D4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.24■□□□□ 0.51
LYSMD3Q7Z3D4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD3Q7Z3D4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD3Q7Z3D4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD3Q7Z3D4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LYSMD3Q7Z3D4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.24■□□□□ 0.51
LYSMD3Q7Z3D4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD3Q7Z3D4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.23■□□□□ 0.51
LYSMD3Q7Z3D4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD3Q7Z3D4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.23■□□□□ 0.51
LYSMD3Q7Z3D4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.23■□□□□ 0.51
LYSMD3Q7Z3D4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.23■□□□□ 0.51
LYSMD3Q7Z3D4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD3Q7Z3D4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.23■□□□□ 0.51
LYSMD3Q7Z3D4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD3Q7Z3D4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD3Q7Z3D4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD3Q7Z3D4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD3Q7Z3D4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD3Q7Z3D4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD3Q7Z3D4 AL645929.1-201ENST00000420084 975 ntBASIC18.23■□□□□ 0.51
LYSMD3Q7Z3D4 KRT18P48-201ENST00000434763 852 ntBASIC18.23■□□□□ 0.51
LYSMD3Q7Z3D4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD3Q7Z3D4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.23■□□□□ 0.51
LYSMD3Q7Z3D4 AL136038.3-201ENST00000561909 1096 ntBASIC18.23■□□□□ 0.51
LYSMD3Q7Z3D4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD3Q7Z3D4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.23■□□□□ 0.51
LYSMD3Q7Z3D4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD3Q7Z3D4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.23■□□□□ 0.51
LYSMD3Q7Z3D4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD3Q7Z3D4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD3Q7Z3D4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 AP003733.1-201ENST00000491725 852 ntBASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 FAM86EP-206ENST00000510506 987 ntBASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 AC135050.7-201ENST00000624508 2218 ntBASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 AC005332.1-201ENST00000577698 1310 ntBASIC18.22■□□□□ 0.51
LYSMD3Q7Z3D4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 KRT89P-201ENST00000620027 1478 ntBASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 AL096828.2-201ENST00000567259 1965 ntBASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 RNF126P1-202ENST00000569893 925 ntBASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 AC008687.5-201ENST00000593746 558 ntBASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 AC091076.1-201ENST00000610741 619 ntBASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.21■□□□□ 0.51
LYSMD3Q7Z3D4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms