Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 PKD1P1-201ENST00000458669 6805 ntBASIC16.74■□□□□ 0.27
ZNF550Q7Z398 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.74■□□□□ 0.27
ZNF550Q7Z398 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 SEC1P-202ENST00000473944 940 ntBASIC16.74■□□□□ 0.27
ZNF550Q7Z398 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 AC024243.1-201ENST00000609234 778 ntBASIC16.74■□□□□ 0.27
ZNF550Q7Z398 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
ZNF550Q7Z398 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 AC008687.5-201ENST00000593746 558 ntBASIC16.73■□□□□ 0.27
ZNF550Q7Z398 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 AL138966.2-201ENST00000621997 464 ntBASIC16.73■□□□□ 0.27
ZNF550Q7Z398 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF550Q7Z398 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 AC099343.3-201ENST00000605834 2503 ntBASIC16.72■□□□□ 0.27
ZNF550Q7Z398 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.72■□□□□ 0.27
ZNF550Q7Z398 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 AC022616.7-201ENST00000525383 220 ntBASIC16.72■□□□□ 0.27
ZNF550Q7Z398 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF550Q7Z398 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms