Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 MFF-223ENST00000524634 647 ntTSL 2 BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC9.85□□□□□ -0.83
UBR4Q5T4S7 MIR5572-201ENST00000583188 137 ntBASIC9.85□□□□□ -0.83
UBR4Q5T4S7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 PMPCAP1-201ENST00000508114 1576 ntBASIC9.84□□□□□ -0.83
UBR4Q5T4S7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 AC096734.2-201ENST00000562054 433 ntBASIC9.84□□□□□ -0.83
UBR4Q5T4S7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 AC007541.1-201ENST00000570282 1469 ntBASIC9.84□□□□□ -0.83
UBR4Q5T4S7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 API5-211ENST00000534695 560 ntTSL 5 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 CD63-210ENST00000550776 870 ntTSL 5 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 AC092720.2-201ENST00000602388 1665 ntBASIC9.84□□□□□ -0.83
UBR4Q5T4S7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
UBR4Q5T4S7 AC008494.3-201ENST00000606615 944 ntBASIC9.84□□□□□ -0.83
UBR4Q5T4S7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 HINT2P1-201ENST00000419438 481 ntBASIC9.83□□□□□ -0.84
UBR4Q5T4S7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 MIR1908-201ENST00000410394 80 ntBASIC9.83□□□□□ -0.84
UBR4Q5T4S7 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 AC140912.1-201ENST00000577171 1054 ntBASIC9.83□□□□□ -0.84
UBR4Q5T4S7 AL512343.1-201ENST00000605837 169 ntBASIC9.83□□□□□ -0.84
UBR4Q5T4S7 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 ANKRD19P-201ENST00000338192 862 ntBASIC9.83□□□□□ -0.84
UBR4Q5T4S7 KRT223P-202ENST00000449164 1292 ntBASIC9.83□□□□□ -0.84
UBR4Q5T4S7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 PLS3-210ENST00000626746 216 ntTSL 4 BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 AL355994.2-201ENST00000447882 704 ntBASIC9.83□□□□□ -0.84
UBR4Q5T4S7 ZNF767P-206ENST00000513792 565 ntBASIC9.83□□□□□ -0.84
UBR4Q5T4S7 ORC6-206ENST00000568364 888 ntTSL 5 BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC9.83□□□□□ -0.84
UBR4Q5T4S7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC9.82□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms