Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.01■□□□□ 0.63
CBX1P83916 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
CBX1P83916 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX1P83916 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.01■□□□□ 0.63
CBX1P83916 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX1P83916 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX1P83916 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX1P83916 AL355312.1-201ENST00000407115 2176 ntBASIC19.01■□□□□ 0.63
CBX1P83916 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CBX1P83916 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CBX1P83916 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX1P83916 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.01■□□□□ 0.63
CBX1P83916 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.01■□□□□ 0.63
CBX1P83916 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.01■□□□□ 0.63
CBX1P83916 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CBX1P83916 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CBX1P83916 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.01■□□□□ 0.63
CBX1P83916 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.01■□□□□ 0.63
CBX1P83916 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.01■□□□□ 0.63
CBX1P83916 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.01■□□□□ 0.63
CBX1P83916 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CBX1P83916 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
CBX1P83916 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX1P83916 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX1P83916 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CBX1P83916 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX1P83916 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CBX1P83916 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CBX1P83916 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CBX1P83916 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.01■□□□□ 0.63
CBX1P83916 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CBX1P83916 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CBX1P83916 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19■□□□□ 0.63
CBX1P83916 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19■□□□□ 0.63
CBX1P83916 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19■□□□□ 0.63
CBX1P83916 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CBX1P83916 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CBX1P83916 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19■□□□□ 0.63
CBX1P83916 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19■□□□□ 0.63
CBX1P83916 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CBX1P83916 HLA-G-202ENST00000376815 851 ntBASIC19■□□□□ 0.63
CBX1P83916 HLA-G-203ENST00000376818 1127 ntBASIC19■□□□□ 0.63
CBX1P83916 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
CBX1P83916 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19■□□□□ 0.63
CBX1P83916 OR2A1-AS1-204ENST00000470435 602 ntBASIC19■□□□□ 0.63
CBX1P83916 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CBX1P83916 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19■□□□□ 0.63
CBX1P83916 SF1-220ENST00000626028 704 ntTSL 2 BASIC19■□□□□ 0.63
CBX1P83916 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CBX1P83916 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CBX1P83916 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CBX1P83916 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
CBX1P83916 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CBX1P83916 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CBX1P83916 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CBX1P83916 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC19■□□□□ 0.63
CBX1P83916 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CBX1P83916 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CBX1P83916 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CBX1P83916 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19■□□□□ 0.63
CBX1P83916 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19■□□□□ 0.63
CBX1P83916 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CBX1P83916 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CBX1P83916 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CBX1P83916 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
CBX1P83916 AL096828.2-201ENST00000567259 1965 ntBASIC18.99■□□□□ 0.63
CBX1P83916 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CBX1P83916 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBX1P83916 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBX1P83916 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
CBX1P83916 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CBX1P83916 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CBX1P83916 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBX1P83916 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBX1P83916 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CBX1P83916 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBX1P83916 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBX1P83916 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CBX1P83916 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
CBX1P83916 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CBX1P83916 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CBX1P83916 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CBX1P83916 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.98■□□□□ 0.63
CBX1P83916 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CBX1P83916 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CBX1P83916 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
CBX1P83916 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CBX1P83916 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
CBX1P83916 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.98■□□□□ 0.63
CBX1P83916 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.98■□□□□ 0.63
CBX1P83916 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CBX1P83916 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CBX1P83916 AP002414.2-201ENST00000591780 3365 ntBASIC18.98■□□□□ 0.63
CBX1P83916 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.98■□□□□ 0.63
CBX1P83916 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.98■□□□□ 0.63
CBX1P83916 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CBX1P83916 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CBX1P83916 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.98■□□□□ 0.63
CBX1P83916 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CBX1P83916 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms