Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNTNAP1P78357 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.54■■□□□ 1.04
CNTNAP1P78357 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CNTNAP1P78357 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC21.54■■□□□ 1.04
CNTNAP1P78357 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.54■■□□□ 1.04
CNTNAP1P78357 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.54■■□□□ 1.04
CNTNAP1P78357 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNTNAP1P78357 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.53■■□□□ 1.04
CNTNAP1P78357 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CNTNAP1P78357 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNTNAP1P78357 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC21.53■■□□□ 1.04
CNTNAP1P78357 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC21.53■■□□□ 1.04
CNTNAP1P78357 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
CNTNAP1P78357 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC21.53■■□□□ 1.04
CNTNAP1P78357 RBM7-207ENST00000544582 692 ntTSL 3 BASIC21.53■■□□□ 1.04
CNTNAP1P78357 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CNTNAP1P78357 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC21.53■■□□□ 1.04
CNTNAP1P78357 AC107918.4-202ENST00000641623 219 ntBASIC21.53■■□□□ 1.04
CNTNAP1P78357 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CNTNAP1P78357 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
CNTNAP1P78357 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.53■■□□□ 1.04
CNTNAP1P78357 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.53■■□□□ 1.04
CNTNAP1P78357 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNTNAP1P78357 LINC00602-201ENST00000629776 2065 ntBASIC21.53■■□□□ 1.04
CNTNAP1P78357 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP1P78357 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CNTNAP1P78357 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP1P78357 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP1P78357 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.52■■□□□ 1.04
CNTNAP1P78357 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.52■■□□□ 1.04
CNTNAP1P78357 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC21.52■■□□□ 1.04
CNTNAP1P78357 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.52■■□□□ 1.04
CNTNAP1P78357 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC21.52■■□□□ 1.04
CNTNAP1P78357 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.52■■□□□ 1.04
CNTNAP1P78357 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.52■■□□□ 1.04
CNTNAP1P78357 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP1P78357 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.52■■□□□ 1.04
CNTNAP1P78357 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP1P78357 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP1P78357 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP1P78357 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP1P78357 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CNTNAP1P78357 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.52■■□□□ 1.04
CNTNAP1P78357 AC005332.7-201ENST00000614046 2005 ntBASIC21.52■■□□□ 1.04
CNTNAP1P78357 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP1P78357 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNTNAP1P78357 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CNTNAP1P78357 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNTNAP1P78357 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.51■■□□□ 1.03
CNTNAP1P78357 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CNTNAP1P78357 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNTNAP1P78357 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNTNAP1P78357 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.51■■□□□ 1.03
CNTNAP1P78357 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNTNAP1P78357 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNTNAP1P78357 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CNTNAP1P78357 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNTNAP1P78357 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CNTNAP1P78357 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNTNAP1P78357 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CNTNAP1P78357 AC005034.1-201ENST00000426657 489 ntBASIC21.51■■□□□ 1.03
CNTNAP1P78357 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC21.51■■□□□ 1.03
CNTNAP1P78357 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.51■■□□□ 1.03
CNTNAP1P78357 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.51■■□□□ 1.03
CNTNAP1P78357 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
CNTNAP1P78357 AL139288.1-201ENST00000623748 933 ntBASIC21.51■■□□□ 1.03
CNTNAP1P78357 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CNTNAP1P78357 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.51■■□□□ 1.03
CNTNAP1P78357 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNTNAP1P78357 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.51■■□□□ 1.03
CNTNAP1P78357 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNTNAP1P78357 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CNTNAP1P78357 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.51■■□□□ 1.03
CNTNAP1P78357 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.51■■□□□ 1.03
CNTNAP1P78357 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNTNAP1P78357 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC21.5■■□□□ 1.03
CNTNAP1P78357 ATP6V0CP3-201ENST00000417255 467 ntBASIC21.5■■□□□ 1.03
CNTNAP1P78357 ABCD1P5-201ENST00000445663 754 ntBASIC21.5■■□□□ 1.03
CNTNAP1P78357 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CNTNAP1P78357 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC21.5■■□□□ 1.03
CNTNAP1P78357 AC027612.4-201ENST00000605371 583 ntBASIC21.5■■□□□ 1.03
CNTNAP1P78357 AC093028.1-201ENST00000622998 982 ntBASIC21.5■■□□□ 1.03
CNTNAP1P78357 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21.5■■□□□ 1.03
CNTNAP1P78357 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC21.5■■□□□ 1.03
CNTNAP1P78357 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CNTNAP1P78357 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
CNTNAP1P78357 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.5■■□□□ 1.03
CNTNAP1P78357 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CNTNAP1P78357 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CNTNAP1P78357 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CNTNAP1P78357 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CNTNAP1P78357 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.5■■□□□ 1.03
CNTNAP1P78357 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CNTNAP1P78357 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
CNTNAP1P78357 AC002310.6-201ENST00000624451 1377 ntBASIC21.5■■□□□ 1.03
CNTNAP1P78357 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CNTNAP1P78357 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC21.5■■□□□ 1.03
CNTNAP1P78357 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CNTNAP1P78357 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CNTNAP1P78357 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms