Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC12.73□□□□□ -0.37
CKS1BP61024 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CKS1BP61024 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC12.73□□□□□ -0.37
CKS1BP61024 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC12.73□□□□□ -0.37
CKS1BP61024 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC12.73□□□□□ -0.37
CKS1BP61024 AL512353.2-201ENST00000448759 1962 ntBASIC12.73□□□□□ -0.37
CKS1BP61024 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC12.73□□□□□ -0.37
CKS1BP61024 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC12.73□□□□□ -0.37
CKS1BP61024 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC12.73□□□□□ -0.37
CKS1BP61024 AC006557.6-201ENST00000623071 864 ntBASIC12.73□□□□□ -0.37
CKS1BP61024 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CKS1BP61024 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC12.73□□□□□ -0.37
CKS1BP61024 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CKS1BP61024 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.73□□□□□ -0.37
CKS1BP61024 AL122018.1-201ENST00000446607 2310 ntBASIC12.73□□□□□ -0.37
CKS1BP61024 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CKS1BP61024 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.73□□□□□ -0.37
CKS1BP61024 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC12.73□□□□□ -0.37
CKS1BP61024 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CKS1BP61024 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS1BP61024 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CKS1BP61024 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS1BP61024 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC12.72□□□□□ -0.37
CKS1BP61024 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CKS1BP61024 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
CKS1BP61024 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
CKS1BP61024 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CKS1BP61024 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS1BP61024 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC12.72□□□□□ -0.37
CKS1BP61024 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS1BP61024 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
CKS1BP61024 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS1BP61024 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS1BP61024 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC12.72□□□□□ -0.37
CKS1BP61024 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS1BP61024 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS1BP61024 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS1BP61024 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS1BP61024 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS1BP61024 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
CKS1BP61024 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CKS1BP61024 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS1BP61024 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CKS1BP61024 FEM1AP3-201ENST00000403722 1741 ntBASIC12.72□□□□□ -0.37
CKS1BP61024 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS1BP61024 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC12.72□□□□□ -0.37
CKS1BP61024 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CKS1BP61024 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC12.72□□□□□ -0.37
CKS1BP61024 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CKS1BP61024 NME6-213ENST00000451657 871 ntTSL 2 BASIC12.72□□□□□ -0.37
CKS1BP61024 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC12.72□□□□□ -0.37
CKS1BP61024 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.72□□□□□ -0.37
CKS1BP61024 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC12.72□□□□□ -0.37
CKS1BP61024 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC12.72□□□□□ -0.37
CKS1BP61024 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CKS1BP61024 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC12.72□□□□□ -0.37
CKS1BP61024 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC12.72□□□□□ -0.37
CKS1BP61024 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC12.72□□□□□ -0.37
CKS1BP61024 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS1BP61024 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC12.72□□□□□ -0.37
CKS1BP61024 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC12.72□□□□□ -0.37
CKS1BP61024 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CKS1BP61024 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CKS1BP61024 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CKS1BP61024 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CKS1BP61024 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC12.72□□□□□ -0.37
CKS1BP61024 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS1BP61024 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS1BP61024 BICD1-207ENST00000551848 1962 ntBASIC12.72□□□□□ -0.37
CKS1BP61024 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
CKS1BP61024 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CKS1BP61024 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
CKS1BP61024 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS1BP61024 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CKS1BP61024 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS1BP61024 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CKS1BP61024 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.71□□□□□ -0.37
CKS1BP61024 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC12.71□□□□□ -0.37
CKS1BP61024 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC12.71□□□□□ -0.37
CKS1BP61024 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CKS1BP61024 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CKS1BP61024 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC12.71□□□□□ -0.37
CKS1BP61024 LINC02228-204ENST00000642115 2962 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms