Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
WNT3AP56704 DUX4L26-201ENST00000489078 1255 ntBASIC18.36■□□□□ 0.53
WNT3AP56704 KRT18P21-201ENST00000515767 1272 ntBASIC18.36■□□□□ 0.53
WNT3AP56704 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
WNT3AP56704 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
WNT3AP56704 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
WNT3AP56704 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
WNT3AP56704 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.36■□□□□ 0.53
WNT3AP56704 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
WNT3AP56704 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
WNT3AP56704 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
WNT3AP56704 AP000997.3-201ENST00000623333 2250 ntBASIC18.36■□□□□ 0.53
WNT3AP56704 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
WNT3AP56704 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
WNT3AP56704 AL133373.2-201ENST00000623187 2828 ntBASIC18.36■□□□□ 0.53
WNT3AP56704 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.35■□□□□ 0.53
WNT3AP56704 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
WNT3AP56704 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
WNT3AP56704 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
WNT3AP56704 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
WNT3AP56704 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
WNT3AP56704 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
WNT3AP56704 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
WNT3AP56704 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.35■□□□□ 0.53
WNT3AP56704 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
WNT3AP56704 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
WNT3AP56704 AC132938.6-201ENST00000623828 1655 ntBASIC18.35■□□□□ 0.53
WNT3AP56704 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
WNT3AP56704 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
WNT3AP56704 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
WNT3AP56704 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
WNT3AP56704 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.35■□□□□ 0.53
WNT3AP56704 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
WNT3AP56704 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
WNT3AP56704 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.35■□□□□ 0.53
WNT3AP56704 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.35■□□□□ 0.53
WNT3AP56704 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.35■□□□□ 0.53
WNT3AP56704 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
WNT3AP56704 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.35■□□□□ 0.53
WNT3AP56704 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.35■□□□□ 0.53
WNT3AP56704 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.35■□□□□ 0.53
WNT3AP56704 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
WNT3AP56704 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
WNT3AP56704 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
WNT3AP56704 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
WNT3AP56704 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
WNT3AP56704 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
WNT3AP56704 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
WNT3AP56704 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.35■□□□□ 0.53
WNT3AP56704 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
WNT3AP56704 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.35■□□□□ 0.53
WNT3AP56704 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
WNT3AP56704 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
WNT3AP56704 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
WNT3AP56704 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
WNT3AP56704 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
WNT3AP56704 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
WNT3AP56704 NOC2LP2-201ENST00000407594 1944 ntBASIC18.34■□□□□ 0.53
WNT3AP56704 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
WNT3AP56704 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
WNT3AP56704 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
WNT3AP56704 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
WNT3AP56704 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.34■□□□□ 0.53
WNT3AP56704 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.34■□□□□ 0.53
WNT3AP56704 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.34■□□□□ 0.53
WNT3AP56704 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.34■□□□□ 0.53
WNT3AP56704 FAM8A6P-201ENST00000407496 1135 ntBASIC18.34■□□□□ 0.53
WNT3AP56704 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
WNT3AP56704 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.34■□□□□ 0.53
WNT3AP56704 AC022616.7-201ENST00000525383 220 ntBASIC18.34■□□□□ 0.53
WNT3AP56704 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.34■□□□□ 0.53
WNT3AP56704 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.34■□□□□ 0.53
WNT3AP56704 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
WNT3AP56704 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.34■□□□□ 0.53
WNT3AP56704 HYMAI.1-201ENST00000620949 238 ntBASIC18.34■□□□□ 0.53
WNT3AP56704 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.34■□□□□ 0.53
WNT3AP56704 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
WNT3AP56704 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
WNT3AP56704 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
WNT3AP56704 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
WNT3AP56704 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.34■□□□□ 0.53
WNT3AP56704 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
WNT3AP56704 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
WNT3AP56704 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
WNT3AP56704 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
WNT3AP56704 AC008764.6-201ENST00000595909 2069 ntBASIC18.34■□□□□ 0.53
WNT3AP56704 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
WNT3AP56704 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
WNT3AP56704 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
WNT3AP56704 LINC00167-201ENST00000530583 1419 ntBASIC18.33■□□□□ 0.53
WNT3AP56704 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
WNT3AP56704 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.33■□□□□ 0.53
WNT3AP56704 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
WNT3AP56704 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
WNT3AP56704 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
WNT3AP56704 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
WNT3AP56704 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
WNT3AP56704 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
WNT3AP56704 HBZP1-201ENST00000354915 429 ntBASIC18.33■□□□□ 0.52
WNT3AP56704 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms