Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SUMO3P55854 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SUMO3P55854 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SUMO3P55854 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SUMO3P55854 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
SUMO3P55854 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.43■□□□□ 0.22
SUMO3P55854 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.43■□□□□ 0.22
SUMO3P55854 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.43■□□□□ 0.22
SUMO3P55854 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SUMO3P55854 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SUMO3P55854 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.42■□□□□ 0.22
SUMO3P55854 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SUMO3P55854 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SUMO3P55854 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
SUMO3P55854 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SUMO3P55854 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SUMO3P55854 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SUMO3P55854 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SUMO3P55854 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SUMO3P55854 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SUMO3P55854 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
SUMO3P55854 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.42■□□□□ 0.22
SUMO3P55854 Z83836.1-201ENST00000624605 1642 ntBASIC16.42■□□□□ 0.22
SUMO3P55854 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SUMO3P55854 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.42■□□□□ 0.22
SUMO3P55854 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SUMO3P55854 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SUMO3P55854 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.42■□□□□ 0.22
SUMO3P55854 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.42■□□□□ 0.22
SUMO3P55854 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
SUMO3P55854 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.42■□□□□ 0.22
SUMO3P55854 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SUMO3P55854 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SUMO3P55854 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SUMO3P55854 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SUMO3P55854 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SUMO3P55854 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.42■□□□□ 0.22
SUMO3P55854 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.42■□□□□ 0.22
SUMO3P55854 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
SUMO3P55854 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SUMO3P55854 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SUMO3P55854 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SUMO3P55854 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.42■□□□□ 0.22
SUMO3P55854 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.41■□□□□ 0.22
SUMO3P55854 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
SUMO3P55854 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SUMO3P55854 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SUMO3P55854 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SUMO3P55854 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SUMO3P55854 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.41■□□□□ 0.22
SUMO3P55854 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SUMO3P55854 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SUMO3P55854 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SUMO3P55854 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SUMO3P55854 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.41■□□□□ 0.22
SUMO3P55854 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SUMO3P55854 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.41■□□□□ 0.22
SUMO3P55854 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.41■□□□□ 0.22
SUMO3P55854 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SUMO3P55854 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SUMO3P55854 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SUMO3P55854 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SUMO3P55854 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SUMO3P55854 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SUMO3P55854 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.41■□□□□ 0.22
SUMO3P55854 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SUMO3P55854 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
SUMO3P55854 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.41■□□□□ 0.22
SUMO3P55854 RNF126P1-202ENST00000569893 925 ntBASIC16.41■□□□□ 0.22
SUMO3P55854 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.41■□□□□ 0.22
SUMO3P55854 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
SUMO3P55854 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
SUMO3P55854 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SUMO3P55854 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.41■□□□□ 0.22
SUMO3P55854 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SUMO3P55854 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.41■□□□□ 0.22
SUMO3P55854 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SUMO3P55854 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
SUMO3P55854 AC005332.1-201ENST00000577698 1310 ntBASIC16.41■□□□□ 0.22
SUMO3P55854 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SUMO3P55854 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SUMO3P55854 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
SUMO3P55854 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
SUMO3P55854 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SUMO3P55854 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SUMO3P55854 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SUMO3P55854 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.41■□□□□ 0.22
SUMO3P55854 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SUMO3P55854 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.4■□□□□ 0.22
SUMO3P55854 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUMO3P55854 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SUMO3P55854 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.4■□□□□ 0.22
SUMO3P55854 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SUMO3P55854 KRT18P55-202ENST00000578578 1546 ntBASIC16.4■□□□□ 0.22
SUMO3P55854 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.4■□□□□ 0.22
SUMO3P55854 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SUMO3P55854 AC138932.1-201ENST00000534164 6830 ntBASIC16.4■□□□□ 0.22
SUMO3P55854 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.4■□□□□ 0.22
SUMO3P55854 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SUMO3P55854 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms