Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH12P55289 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.95■□□□□ 0.3
CDH12P55289 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.95■□□□□ 0.3
CDH12P55289 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH12P55289 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CDH12P55289 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH12P55289 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH12P55289 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH12P55289 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH12P55289 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CDH12P55289 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH12P55289 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH12P55289 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH12P55289 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH12P55289 AC012317.2-201ENST00000623305 2251 ntBASIC16.95■□□□□ 0.3
CDH12P55289 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH12P55289 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CDH12P55289 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH12P55289 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH12P55289 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH12P55289 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDH12P55289 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH12P55289 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH12P55289 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH12P55289 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDH12P55289 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CDH12P55289 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH12P55289 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH12P55289 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH12P55289 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH12P55289 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH12P55289 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CDH12P55289 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH12P55289 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH12P55289 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDH12P55289 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH12P55289 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH12P55289 CA15P1-201ENST00000481698 905 ntBASIC16.94■□□□□ 0.3
CDH12P55289 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH12P55289 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH12P55289 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.94■□□□□ 0.3
CDH12P55289 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH12P55289 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH12P55289 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH12P55289 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CDH12P55289 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH12P55289 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH12P55289 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH12P55289 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH12P55289 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.94■□□□□ 0.3
CDH12P55289 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH12P55289 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH12P55289 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH12P55289 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH12P55289 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH12P55289 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CDH12P55289 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH12P55289 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.93■□□□□ 0.3
CDH12P55289 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH12P55289 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH12P55289 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH12P55289 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDH12P55289 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH12P55289 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH12P55289 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CDH12P55289 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH12P55289 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH12P55289 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.93■□□□□ 0.3
CDH12P55289 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDH12P55289 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH12P55289 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.93■□□□□ 0.3
CDH12P55289 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.93■□□□□ 0.3
CDH12P55289 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.93■□□□□ 0.3
CDH12P55289 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.93■□□□□ 0.3
CDH12P55289 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH12P55289 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
CDH12P55289 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.93■□□□□ 0.3
CDH12P55289 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDH12P55289 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CDH12P55289 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH12P55289 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH12P55289 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH12P55289 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH12P55289 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH12P55289 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDH12P55289 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH12P55289 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH12P55289 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH12P55289 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH12P55289 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH12P55289 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.92■□□□□ 0.3
CDH12P55289 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH12P55289 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH12P55289 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CDH12P55289 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH12P55289 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH12P55289 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH12P55289 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.92■□□□□ 0.3
CDH12P55289 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.92■□□□□ 0.3
CDH12P55289 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms