Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
ZNF140P52738 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF140P52738 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF140P52738 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ZNF140P52738 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF140P52738 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF140P52738 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF140P52738 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.07■□□□□ 0.48
ZNF140P52738 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.07■□□□□ 0.48
ZNF140P52738 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ZNF140P52738 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.07■□□□□ 0.48
ZNF140P52738 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.07■□□□□ 0.48
ZNF140P52738 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.07■□□□□ 0.48
ZNF140P52738 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.07■□□□□ 0.48
ZNF140P52738 AC020763.4-201ENST00000623414 4170 ntBASIC18.07■□□□□ 0.48
ZNF140P52738 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF140P52738 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF140P52738 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ZNF140P52738 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
ZNF140P52738 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
ZNF140P52738 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.07■□□□□ 0.48
ZNF140P52738 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF140P52738 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF140P52738 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF140P52738 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF140P52738 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF140P52738 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF140P52738 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ZNF140P52738 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
ZNF140P52738 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF140P52738 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.06■□□□□ 0.48
ZNF140P52738 AC068880.1-201ENST00000507289 2297 ntBASIC18.06■□□□□ 0.48
ZNF140P52738 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF140P52738 AL133373.2-201ENST00000623187 2828 ntBASIC18.06■□□□□ 0.48
ZNF140P52738 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.06■□□□□ 0.48
ZNF140P52738 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF140P52738 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.06■□□□□ 0.48
ZNF140P52738 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.06■□□□□ 0.48
ZNF140P52738 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ZNF140P52738 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF140P52738 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.06■□□□□ 0.48
ZNF140P52738 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF140P52738 AP003733.1-201ENST00000491725 852 ntBASIC18.06■□□□□ 0.48
ZNF140P52738 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.06■□□□□ 0.48
ZNF140P52738 AL049597.2-201ENST00000565575 961 ntBASIC18.06■□□□□ 0.48
ZNF140P52738 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
ZNF140P52738 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.06■□□□□ 0.48
ZNF140P52738 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF140P52738 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF140P52738 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF140P52738 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF140P52738 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ZNF140P52738 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.06■□□□□ 0.48
ZNF140P52738 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF140P52738 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
ZNF140P52738 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.06■□□□□ 0.48
ZNF140P52738 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.06■□□□□ 0.48
ZNF140P52738 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF140P52738 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF140P52738 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF140P52738 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF140P52738 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF140P52738 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ZNF140P52738 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF140P52738 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.05■□□□□ 0.48
ZNF140P52738 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF140P52738 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF140P52738 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF140P52738 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF140P52738 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF140P52738 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.05■□□□□ 0.48
ZNF140P52738 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF140P52738 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF140P52738 KRT18P55-202ENST00000578578 1546 ntBASIC18.05■□□□□ 0.48
ZNF140P52738 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
ZNF140P52738 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF140P52738 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.05■□□□□ 0.48
ZNF140P52738 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.05■□□□□ 0.48
ZNF140P52738 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.05■□□□□ 0.48
ZNF140P52738 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.05■□□□□ 0.48
ZNF140P52738 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.05■□□□□ 0.48
ZNF140P52738 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.05■□□□□ 0.48
ZNF140P52738 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF140P52738 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF140P52738 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF140P52738 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
ZNF140P52738 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF140P52738 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
ZNF140P52738 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF140P52738 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF140P52738 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
ZNF140P52738 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF140P52738 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF140P52738 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF140P52738 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF140P52738 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
ZNF140P52738 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF140P52738 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF140P52738 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF140P52738 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms