Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NEK3P51956 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEK3P51956 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NEK3P51956 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEK3P51956 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NEK3P51956 PCED1CP-201ENST00000419887 785 ntBASIC18.73■□□□□ 0.59
NEK3P51956 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.73■□□□□ 0.59
NEK3P51956 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.73■□□□□ 0.59
NEK3P51956 ZNF444P1-201ENST00000559497 298 ntBASIC18.73■□□□□ 0.59
NEK3P51956 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEK3P51956 AC083849.1-201ENST00000615227 514 ntBASIC18.73■□□□□ 0.59
NEK3P51956 HYMAI.1-201ENST00000620949 238 ntBASIC18.73■□□□□ 0.59
NEK3P51956 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NEK3P51956 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NEK3P51956 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
NEK3P51956 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.73■□□□□ 0.59
NEK3P51956 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NEK3P51956 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEK3P51956 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NEK3P51956 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NEK3P51956 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEK3P51956 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
NEK3P51956 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
NEK3P51956 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEK3P51956 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NEK3P51956 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NEK3P51956 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.73■□□□□ 0.59
NEK3P51956 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.73■□□□□ 0.59
NEK3P51956 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NEK3P51956 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEK3P51956 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NEK3P51956 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NEK3P51956 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEK3P51956 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
NEK3P51956 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NEK3P51956 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.72■□□□□ 0.59
NEK3P51956 AC034236.2-201ENST00000606662 1610 ntBASIC18.72■□□□□ 0.59
NEK3P51956 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEK3P51956 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.72■□□□□ 0.59
NEK3P51956 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEK3P51956 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NEK3P51956 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.72■□□□□ 0.59
NEK3P51956 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.72■□□□□ 0.59
NEK3P51956 VENTXP5-201ENST00000523979 775 ntBASIC18.72■□□□□ 0.59
NEK3P51956 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.72■□□□□ 0.59
NEK3P51956 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEK3P51956 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.72■□□□□ 0.59
NEK3P51956 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
NEK3P51956 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.72■□□□□ 0.59
NEK3P51956 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEK3P51956 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NEK3P51956 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NEK3P51956 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
NEK3P51956 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEK3P51956 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NEK3P51956 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NEK3P51956 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEK3P51956 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEK3P51956 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NEK3P51956 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEK3P51956 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.71■□□□□ 0.59
NEK3P51956 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.71■□□□□ 0.59
NEK3P51956 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.71■□□□□ 0.59
NEK3P51956 AL136038.3-201ENST00000561909 1096 ntBASIC18.71■□□□□ 0.59
NEK3P51956 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NEK3P51956 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NEK3P51956 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEK3P51956 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEK3P51956 AC005332.1-201ENST00000577698 1310 ntBASIC18.71■□□□□ 0.59
NEK3P51956 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NEK3P51956 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NEK3P51956 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEK3P51956 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NEK3P51956 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.71■□□□□ 0.58
NEK3P51956 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
NEK3P51956 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.7■□□□□ 0.58
NEK3P51956 IER3-202ENST00000376377 1350 ntBASIC18.7■□□□□ 0.58
NEK3P51956 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.7■□□□□ 0.58
NEK3P51956 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEK3P51956 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEK3P51956 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.7■□□□□ 0.58
NEK3P51956 AC139713.2-201ENST00000641328 2723 ntBASIC18.7■□□□□ 0.58
NEK3P51956 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEK3P51956 AC135776.1-201ENST00000319817 2481 ntBASIC18.7■□□□□ 0.58
NEK3P51956 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.7■□□□□ 0.58
NEK3P51956 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NEK3P51956 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.7■□□□□ 0.58
NEK3P51956 UPK3BP1-201ENST00000428678 509 ntBASIC18.7■□□□□ 0.58
NEK3P51956 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.7■□□□□ 0.58
NEK3P51956 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEK3P51956 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEK3P51956 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.7■□□□□ 0.58
NEK3P51956 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NEK3P51956 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.7■□□□□ 0.58
NEK3P51956 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.7■□□□□ 0.58
NEK3P51956 MIR3917-201ENST00000580971 93 ntBASIC18.7■□□□□ 0.58
NEK3P51956 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NEK3P51956 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.7■□□□□ 0.58
NEK3P51956 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NEK3P51956 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms