Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.16■□□□□ 0.34
GABRA4P48169 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABRA4P48169 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABRA4P48169 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABRA4P48169 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GABRA4P48169 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABRA4P48169 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
GABRA4P48169 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GABRA4P48169 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABRA4P48169 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
GABRA4P48169 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.16■□□□□ 0.34
GABRA4P48169 AC112698.1-201ENST00000510299 916 ntBASIC17.16■□□□□ 0.34
GABRA4P48169 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GABRA4P48169 AC091304.2-201ENST00000564639 760 ntBASIC17.16■□□□□ 0.34
GABRA4P48169 AC111152.3-201ENST00000569699 673 ntBASIC17.16■□□□□ 0.34
GABRA4P48169 RN7SL510P-201ENST00000581311 263 ntBASIC17.16■□□□□ 0.34
GABRA4P48169 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.16■□□□□ 0.34
GABRA4P48169 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.16■□□□□ 0.34
GABRA4P48169 AL138831.2-201ENST00000606564 490 ntBASIC17.16■□□□□ 0.34
GABRA4P48169 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.16■□□□□ 0.34
GABRA4P48169 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.16■□□□□ 0.34
GABRA4P48169 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
GABRA4P48169 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
GABRA4P48169 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.16■□□□□ 0.34
GABRA4P48169 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABRA4P48169 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABRA4P48169 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.16■□□□□ 0.34
GABRA4P48169 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABRA4P48169 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABRA4P48169 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABRA4P48169 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
GABRA4P48169 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.16■□□□□ 0.34
GABRA4P48169 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GABRA4P48169 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
GABRA4P48169 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GABRA4P48169 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GABRA4P48169 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GABRA4P48169 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
GABRA4P48169 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.15■□□□□ 0.34
GABRA4P48169 AC125634.1-201ENST00000438758 1403 ntBASIC17.15■□□□□ 0.34
GABRA4P48169 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.15■□□□□ 0.34
GABRA4P48169 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.15■□□□□ 0.34
GABRA4P48169 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GABRA4P48169 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.15■□□□□ 0.34
GABRA4P48169 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
GABRA4P48169 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GABRA4P48169 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GABRA4P48169 POM121L3P-201ENST00000419331 1163 ntBASIC17.15■□□□□ 0.34
GABRA4P48169 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.15■□□□□ 0.34
GABRA4P48169 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.15■□□□□ 0.34
GABRA4P48169 DUTP2-201ENST00000519164 463 ntBASIC17.15■□□□□ 0.34
GABRA4P48169 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.15■□□□□ 0.34
GABRA4P48169 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.15■□□□□ 0.34
GABRA4P48169 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.15■□□□□ 0.34
GABRA4P48169 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.15■□□□□ 0.34
GABRA4P48169 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GABRA4P48169 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
GABRA4P48169 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GABRA4P48169 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GABRA4P48169 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GABRA4P48169 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GABRA4P48169 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.15■□□□□ 0.34
GABRA4P48169 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GABRA4P48169 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.15■□□□□ 0.34
GABRA4P48169 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.15■□□□□ 0.34
GABRA4P48169 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.15■□□□□ 0.34
GABRA4P48169 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GABRA4P48169 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GABRA4P48169 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.15■□□□□ 0.34
GABRA4P48169 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.34
GABRA4P48169 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
GABRA4P48169 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
GABRA4P48169 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
GABRA4P48169 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GABRA4P48169 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
GABRA4P48169 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GABRA4P48169 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GABRA4P48169 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GABRA4P48169 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GABRA4P48169 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.14■□□□□ 0.33
GABRA4P48169 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GABRA4P48169 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.14■□□□□ 0.33
GABRA4P48169 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GABRA4P48169 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
GABRA4P48169 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
GABRA4P48169 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GABRA4P48169 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GABRA4P48169 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.14■□□□□ 0.33
GABRA4P48169 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GABRA4P48169 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.14■□□□□ 0.33
GABRA4P48169 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.14■□□□□ 0.33
GABRA4P48169 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GABRA4P48169 MINOS1P3-201ENST00000457048 203 ntBASIC17.14■□□□□ 0.33
GABRA4P48169 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GABRA4P48169 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.14■□□□□ 0.33
GABRA4P48169 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GABRA4P48169 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.14■□□□□ 0.33
GABRA4P48169 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.14■□□□□ 0.33
GABRA4P48169 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.14■□□□□ 0.33
GABRA4P48169 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms