Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
SNCAP37840 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SNCAP37840 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SNCAP37840 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.98□□□□□ -0.01
SNCAP37840 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNCAP37840 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNCAP37840 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNCAP37840 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNCAP37840 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SNCAP37840 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNCAP37840 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNCAP37840 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNCAP37840 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNCAP37840 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
SNCAP37840 HEIH-201ENST00000623091 1652 ntBASIC14.97□□□□□ -0.01
SNCAP37840 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.97□□□□□ -0.01
SNCAP37840 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.97□□□□□ -0.01
SNCAP37840 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SNCAP37840 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SNCAP37840 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNCAP37840 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.97□□□□□ -0.01
SNCAP37840 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.97□□□□□ -0.01
SNCAP37840 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SNCAP37840 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNCAP37840 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SNCAP37840 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.97□□□□□ -0.01
SNCAP37840 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNCAP37840 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SNCAP37840 KRT16P5-201ENST00000455284 522 ntBASIC14.97□□□□□ -0.01
SNCAP37840 AC069544.1-201ENST00000609399 999 ntBASIC14.97□□□□□ -0.01
SNCAP37840 AC131212.4-201ENST00000623606 975 ntBASIC14.97□□□□□ -0.01
SNCAP37840 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
SNCAP37840 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNCAP37840 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SNCAP37840 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SNCAP37840 RCC2P6-201ENST00000526625 1557 ntBASIC14.97□□□□□ -0.01
SNCAP37840 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNCAP37840 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.97□□□□□ -0.01
SNCAP37840 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.97□□□□□ -0.01
SNCAP37840 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SNCAP37840 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SNCAP37840 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNCAP37840 KRT8P41-201ENST00000533985 1514 ntBASIC14.97□□□□□ -0.01
SNCAP37840 AC008894.3-201ENST00000624324 3103 ntBASIC14.97□□□□□ -0.01
SNCAP37840 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.96□□□□□ -0.01
SNCAP37840 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SNCAP37840 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.96□□□□□ -0.01
SNCAP37840 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SNCAP37840 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SNCAP37840 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.96□□□□□ -0.01
SNCAP37840 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SNCAP37840 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNCAP37840 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNCAP37840 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SNCAP37840 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SNCAP37840 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SNCAP37840 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SNCAP37840 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SNCAP37840 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SNCAP37840 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SNCAP37840 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNCAP37840 AC008403.3-201ENST00000598924 454 ntBASIC14.96□□□□□ -0.01
SNCAP37840 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.96□□□□□ -0.01
SNCAP37840 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SNCAP37840 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
SNCAP37840 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNCAP37840 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.96□□□□□ -0.01
SNCAP37840 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SNCAP37840 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.96□□□□□ -0.01
SNCAP37840 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SNCAP37840 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SNCAP37840 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SNCAP37840 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SNCAP37840 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.96□□□□□ -0.02
SNCAP37840 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SNCAP37840 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SNCAP37840 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNCAP37840 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNCAP37840 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.95□□□□□ -0.02
SNCAP37840 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNCAP37840 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.95□□□□□ -0.02
SNCAP37840 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SNCAP37840 AL391005.1-201ENST00000623953 2435 ntBASIC14.95□□□□□ -0.02
SNCAP37840 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNCAP37840 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNCAP37840 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SNCAP37840 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNCAP37840 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNCAP37840 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.95□□□□□ -0.02
SNCAP37840 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNCAP37840 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNCAP37840 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNCAP37840 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNCAP37840 KRASP1-201ENST00000407852 552 ntBASIC14.95□□□□□ -0.02
SNCAP37840 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNCAP37840 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
SNCAP37840 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNCAP37840 AC026366.1-201ENST00000488803 879 ntBASIC14.95□□□□□ -0.02
SNCAP37840 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.95□□□□□ -0.02
SNCAP37840 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms