Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KRT9P35527 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT9P35527 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.88■□□□□ 0.77
KRT9P35527 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT9P35527 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT9P35527 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.88■□□□□ 0.77
KRT9P35527 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT9P35527 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.88■□□□□ 0.77
KRT9P35527 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.88■□□□□ 0.77
KRT9P35527 TSPY15P-201ENST00000457163 923 ntBASIC19.88■□□□□ 0.77
KRT9P35527 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KRT9P35527 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.88■□□□□ 0.77
KRT9P35527 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT9P35527 AL023803.3-201ENST00000615559 522 ntBASIC19.88■□□□□ 0.77
KRT9P35527 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.88■□□□□ 0.77
KRT9P35527 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.88■□□□□ 0.77
KRT9P35527 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT9P35527 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT9P35527 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
KRT9P35527 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.87■□□□□ 0.77
KRT9P35527 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT9P35527 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT9P35527 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT9P35527 AL596275.1-201ENST00000423464 877 ntBASIC19.87■□□□□ 0.77
KRT9P35527 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT9P35527 AL353719.1-201ENST00000566847 864 ntBASIC19.87■□□□□ 0.77
KRT9P35527 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT9P35527 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
KRT9P35527 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT9P35527 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT9P35527 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
KRT9P35527 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.87■□□□□ 0.77
KRT9P35527 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT9P35527 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.87■□□□□ 0.77
KRT9P35527 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT9P35527 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT9P35527 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT9P35527 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KRT9P35527 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT9P35527 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KRT9P35527 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
KRT9P35527 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT9P35527 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT9P35527 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
KRT9P35527 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.86■□□□□ 0.77
KRT9P35527 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KRT9P35527 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
KRT9P35527 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KRT9P35527 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT9P35527 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT9P35527 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT9P35527 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT9P35527 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.86■□□□□ 0.77
KRT9P35527 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.86■□□□□ 0.77
KRT9P35527 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.86■□□□□ 0.77
KRT9P35527 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.86■□□□□ 0.77
KRT9P35527 AC116562.4-202ENST00000641738 218 ntBASIC19.86■□□□□ 0.77
KRT9P35527 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.86■□□□□ 0.77
KRT9P35527 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KRT9P35527 AL645608.8-201ENST00000606034 2086 ntBASIC19.86■□□□□ 0.77
KRT9P35527 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KRT9P35527 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
KRT9P35527 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
KRT9P35527 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.86■□□□□ 0.77
KRT9P35527 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT9P35527 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT9P35527 AL163051.1-201ENST00000569214 1512 ntBASIC19.86■□□□□ 0.77
KRT9P35527 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
KRT9P35527 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KRT9P35527 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT9P35527 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KRT9P35527 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.86■□□□□ 0.77
KRT9P35527 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
KRT9P35527 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
KRT9P35527 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.85■□□□□ 0.77
KRT9P35527 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT9P35527 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT9P35527 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT9P35527 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT9P35527 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT9P35527 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT9P35527 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.85■□□□□ 0.77
KRT9P35527 MMP23A-201ENST00000234610 1017 ntBASIC19.85■□□□□ 0.77
KRT9P35527 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
KRT9P35527 AP003041.3-201ENST00000527151 707 ntBASIC19.85■□□□□ 0.77
KRT9P35527 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.85■□□□□ 0.77
KRT9P35527 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.85■□□□□ 0.77
KRT9P35527 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.85■□□□□ 0.77
KRT9P35527 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT9P35527 AC006116.8-202ENST00000587620 1550 ntBASIC19.85■□□□□ 0.77
KRT9P35527 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT9P35527 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT9P35527 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT9P35527 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.85■□□□□ 0.77
KRT9P35527 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT9P35527 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.85■□□□□ 0.77
KRT9P35527 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT9P35527 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.85■□□□□ 0.77
KRT9P35527 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT9P35527 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms