Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA3P32297 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA3P32297 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA3P32297 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CHRNA3P32297 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRNA3P32297 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.16■□□□□ 0.66
CHRNA3P32297 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.16■□□□□ 0.66
CHRNA3P32297 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA3P32297 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CHRNA3P32297 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA3P32297 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CHRNA3P32297 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA3P32297 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRNA3P32297 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CHRNA3P32297 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA3P32297 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CHRNA3P32297 HTR7P1-202ENST00000624664 4411 ntBASIC19.16■□□□□ 0.66
CHRNA3P32297 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA3P32297 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHRNA3P32297 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CHRNA3P32297 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA3P32297 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRNA3P32297 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA3P32297 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CHRNA3P32297 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA3P32297 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.15■□□□□ 0.66
CHRNA3P32297 FZD10-202ENST00000539839 3282 ntBASIC19.15■□□□□ 0.66
CHRNA3P32297 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA3P32297 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CHRNA3P32297 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.15■□□□□ 0.66
CHRNA3P32297 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA3P32297 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA3P32297 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA3P32297 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA3P32297 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA3P32297 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.15■□□□□ 0.66
CHRNA3P32297 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.15■□□□□ 0.66
CHRNA3P32297 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA3P32297 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CHRNA3P32297 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA3P32297 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CHRNA3P32297 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA3P32297 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.15■□□□□ 0.66
CHRNA3P32297 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.15■□□□□ 0.66
CHRNA3P32297 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA3P32297 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA3P32297 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CHRNA3P32297 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA3P32297 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA3P32297 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA3P32297 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA3P32297 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA3P32297 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA3P32297 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHRNA3P32297 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CHRNA3P32297 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHRNA3P32297 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA3P32297 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.14■□□□□ 0.65
CHRNA3P32297 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CHRNA3P32297 AL096828.2-201ENST00000567259 1965 ntBASIC19.14■□□□□ 0.65
CHRNA3P32297 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CHRNA3P32297 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA3P32297 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA3P32297 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA3P32297 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA3P32297 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA3P32297 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA3P32297 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CHRNA3P32297 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
CHRNA3P32297 AK4P3-201ENST00000418260 669 ntBASIC19.14■□□□□ 0.65
CHRNA3P32297 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.14■□□□□ 0.65
CHRNA3P32297 AC117947.1-201ENST00000427448 529 ntBASIC19.14■□□□□ 0.65
CHRNA3P32297 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA3P32297 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.14■□□□□ 0.65
CHRNA3P32297 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.14■□□□□ 0.65
CHRNA3P32297 AL445228.2-201ENST00000605589 952 ntBASIC19.14■□□□□ 0.65
CHRNA3P32297 AC139887.4-201ENST00000607877 719 ntBASIC19.14■□□□□ 0.65
CHRNA3P32297 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA3P32297 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA3P32297 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CHRNA3P32297 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA3P32297 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.14■□□□□ 0.65
CHRNA3P32297 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.14■□□□□ 0.65
CHRNA3P32297 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA3P32297 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
CHRNA3P32297 GMCL1P1-201ENST00000463439 1581 ntBASIC19.14■□□□□ 0.65
CHRNA3P32297 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CHRNA3P32297 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA3P32297 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA3P32297 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.14■□□□□ 0.65
CHRNA3P32297 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNA3P32297 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNA3P32297 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNA3P32297 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNA3P32297 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNA3P32297 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
CHRNA3P32297 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHRNA3P32297 COX11P1-201ENST00000489116 835 ntBASIC19.13■□□□□ 0.65
CHRNA3P32297 KRT18P35-201ENST00000510488 1269 ntBASIC19.13■□□□□ 0.65
CHRNA3P32297 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms