Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC1P29353 AC008764.6-201ENST00000595909 2069 ntBASIC16.66■□□□□ 0.26
SHC1P29353 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SHC1P29353 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHC1P29353 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC1P29353 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SHC1P29353 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SHC1P29353 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC1P29353 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC1P29353 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SHC1P29353 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.66■□□□□ 0.26
SHC1P29353 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHC1P29353 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC1P29353 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC1P29353 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC1P29353 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHC1P29353 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.66■□□□□ 0.26
SHC1P29353 TSPY5P-201ENST00000426936 936 ntBASIC16.66■□□□□ 0.26
SHC1P29353 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.66■□□□□ 0.26
SHC1P29353 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHC1P29353 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.66■□□□□ 0.26
SHC1P29353 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.66■□□□□ 0.26
SHC1P29353 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC1P29353 AC112777.1-201ENST00000540175 1423 ntBASIC16.66■□□□□ 0.26
SHC1P29353 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.66■□□□□ 0.26
SHC1P29353 AC010240.3-201ENST00000607688 395 ntBASIC16.66■□□□□ 0.26
SHC1P29353 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHC1P29353 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHC1P29353 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC1P29353 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SHC1P29353 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC1P29353 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.66■□□□□ 0.26
SHC1P29353 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC1P29353 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC1P29353 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.66■□□□□ 0.26
SHC1P29353 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHC1P29353 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SHC1P29353 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.65■□□□□ 0.26
SHC1P29353 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.65■□□□□ 0.26
SHC1P29353 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SHC1P29353 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 MYLKP1-201ENST00000509077 1580 ntBASIC16.65■□□□□ 0.26
SHC1P29353 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SHC1P29353 KRT8P7-201ENST00000533003 1432 ntBASIC16.65■□□□□ 0.26
SHC1P29353 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SHC1P29353 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 AL359075.1-203ENST00000462729 1002 ntBASIC16.65■□□□□ 0.26
SHC1P29353 AC063952.2-201ENST00000498792 1227 ntBASIC16.65■□□□□ 0.26
SHC1P29353 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.65■□□□□ 0.26
SHC1P29353 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SHC1P29353 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
SHC1P29353 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
SHC1P29353 AL157888.1-201ENST00000631930 593 ntBASIC16.65■□□□□ 0.26
SHC1P29353 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SHC1P29353 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SHC1P29353 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC1P29353 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SHC1P29353 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.64■□□□□ 0.26
SHC1P29353 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SHC1P29353 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.64■□□□□ 0.25
SHC1P29353 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.64■□□□□ 0.25
SHC1P29353 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHC1P29353 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
SHC1P29353 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHC1P29353 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SHC1P29353 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHC1P29353 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.64■□□□□ 0.25
SHC1P29353 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.64■□□□□ 0.25
SHC1P29353 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
SHC1P29353 AC022616.7-201ENST00000525383 220 ntBASIC16.64■□□□□ 0.25
SHC1P29353 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.64■□□□□ 0.25
SHC1P29353 AL049597.2-201ENST00000565575 961 ntBASIC16.64■□□□□ 0.25
SHC1P29353 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.64■□□□□ 0.25
SHC1P29353 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.64■□□□□ 0.25
SHC1P29353 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.64■□□□□ 0.25
SHC1P29353 AL031432.5-201ENST00000641059 760 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms