Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN3P26045 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.52■□□□□ 0.56
PTPN3P26045 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PTPN3P26045 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN3P26045 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN3P26045 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
PTPN3P26045 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN3P26045 STARP1-201ENST00000397973 869 ntBASIC18.52■□□□□ 0.56
PTPN3P26045 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PTPN3P26045 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.52■□□□□ 0.56
PTPN3P26045 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
PTPN3P26045 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
PTPN3P26045 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PTPN3P26045 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PTPN3P26045 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.52■□□□□ 0.55
PTPN3P26045 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PTPN3P26045 AL391807.1-203ENST00000604392 2365 ntBASIC18.52■□□□□ 0.55
PTPN3P26045 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PTPN3P26045 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PTPN3P26045 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.51■□□□□ 0.55
PTPN3P26045 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.51■□□□□ 0.55
PTPN3P26045 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN3P26045 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.51■□□□□ 0.55
PTPN3P26045 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN3P26045 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN3P26045 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN3P26045 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN3P26045 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.51■□□□□ 0.55
PTPN3P26045 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
PTPN3P26045 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN3P26045 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.51■□□□□ 0.55
PTPN3P26045 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.51■□□□□ 0.55
PTPN3P26045 AL136038.4-201ENST00000603606 1261 ntBASIC18.51■□□□□ 0.55
PTPN3P26045 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.51■□□□□ 0.55
PTPN3P26045 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN3P26045 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.51■□□□□ 0.55
PTPN3P26045 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN3P26045 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN3P26045 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN3P26045 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.51■□□□□ 0.55
PTPN3P26045 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN3P26045 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN3P26045 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.51■□□□□ 0.55
PTPN3P26045 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.51■□□□□ 0.55
PTPN3P26045 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN3P26045 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PTPN3P26045 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN3P26045 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTPN3P26045 AC005332.8-201ENST00000622750 2735 ntBASIC18.51■□□□□ 0.55
PTPN3P26045 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN3P26045 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.5■□□□□ 0.55
PTPN3P26045 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN3P26045 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN3P26045 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PTPN3P26045 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN3P26045 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
PTPN3P26045 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN3P26045 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PTPN3P26045 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.5■□□□□ 0.55
PTPN3P26045 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN3P26045 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN3P26045 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN3P26045 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN3P26045 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN3P26045 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.5■□□□□ 0.55
PTPN3P26045 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.5■□□□□ 0.55
PTPN3P26045 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN3P26045 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.5■□□□□ 0.55
PTPN3P26045 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.5■□□□□ 0.55
PTPN3P26045 AC008687.5-201ENST00000593746 558 ntBASIC18.5■□□□□ 0.55
PTPN3P26045 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN3P26045 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN3P26045 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PTPN3P26045 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN3P26045 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
PTPN3P26045 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PTPN3P26045 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.5■□□□□ 0.55
PTPN3P26045 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN3P26045 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.5■□□□□ 0.55
PTPN3P26045 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN3P26045 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.5■□□□□ 0.55
PTPN3P26045 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN3P26045 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTPN3P26045 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
PTPN3P26045 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN3P26045 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PTPN3P26045 LINC00167-201ENST00000530583 1419 ntBASIC18.49■□□□□ 0.55
PTPN3P26045 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN3P26045 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN3P26045 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN3P26045 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN3P26045 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN3P26045 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PTPN3P26045 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN3P26045 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PTPN3P26045 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN3P26045 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
PTPN3P26045 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN3P26045 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTPN3P26045 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms