Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COL8A2P25067 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL8A2P25067 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
COL8A2P25067 AC104819.1-201ENST00000504587 486 ntBASIC15.32■□□□□ 0.04
COL8A2P25067 UNC93B7-201ENST00000509439 705 ntBASIC15.32■□□□□ 0.04
COL8A2P25067 FOSL1P1-201ENST00000511041 816 ntBASIC15.32■□□□□ 0.04
COL8A2P25067 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.32■□□□□ 0.04
COL8A2P25067 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.32■□□□□ 0.04
COL8A2P25067 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL8A2P25067 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL8A2P25067 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.32■□□□□ 0.04
COL8A2P25067 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.32■□□□□ 0.04
COL8A2P25067 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL8A2P25067 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.32■□□□□ 0.04
COL8A2P25067 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL8A2P25067 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL8A2P25067 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
COL8A2P25067 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
COL8A2P25067 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.32■□□□□ 0.04
COL8A2P25067 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.32■□□□□ 0.04
COL8A2P25067 LINC00167-201ENST00000530583 1419 ntBASIC15.32■□□□□ 0.04
COL8A2P25067 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL8A2P25067 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL8A2P25067 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COL8A2P25067 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL8A2P25067 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COL8A2P25067 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL8A2P25067 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL8A2P25067 AC009113.1-201ENST00000570267 2443 ntBASIC15.32■□□□□ 0.04
COL8A2P25067 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL8A2P25067 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
COL8A2P25067 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
COL8A2P25067 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COL8A2P25067 CROCCP3-202ENST00000420820 1947 ntBASIC15.31■□□□□ 0.04
COL8A2P25067 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.31■□□□□ 0.04
COL8A2P25067 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.31■□□□□ 0.04
COL8A2P25067 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL8A2P25067 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL8A2P25067 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL8A2P25067 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COL8A2P25067 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COL8A2P25067 TPM4P1-201ENST00000436100 807 ntBASIC15.31■□□□□ 0.04
COL8A2P25067 AC091607.1-201ENST00000490318 1060 ntBASIC15.31■□□□□ 0.04
COL8A2P25067 AC113404.2-201ENST00000507884 177 ntBASIC15.31■□□□□ 0.04
COL8A2P25067 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.31■□□□□ 0.04
COL8A2P25067 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.31■□□□□ 0.04
COL8A2P25067 AC011840.4-201ENST00000578471 627 ntBASIC15.31■□□□□ 0.04
COL8A2P25067 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.31■□□□□ 0.04
COL8A2P25067 AC008687.5-201ENST00000593746 558 ntBASIC15.31■□□□□ 0.04
COL8A2P25067 Z69720.1-201ENST00000601483 472 ntBASIC15.31■□□□□ 0.04
COL8A2P25067 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL8A2P25067 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COL8A2P25067 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.31■□□□□ 0.04
COL8A2P25067 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.31■□□□□ 0.04
COL8A2P25067 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.31■□□□□ 0.04
COL8A2P25067 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL8A2P25067 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL8A2P25067 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COL8A2P25067 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL8A2P25067 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL8A2P25067 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL8A2P25067 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.31■□□□□ 0.04
COL8A2P25067 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL8A2P25067 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
COL8A2P25067 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
COL8A2P25067 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL8A2P25067 AC126763.1-201ENST00000552015 2118 ntBASIC15.31■□□□□ 0.04
COL8A2P25067 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL8A2P25067 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
COL8A2P25067 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
COL8A2P25067 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COL8A2P25067 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COL8A2P25067 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
COL8A2P25067 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COL8A2P25067 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COL8A2P25067 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
COL8A2P25067 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COL8A2P25067 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COL8A2P25067 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COL8A2P25067 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.3■□□□□ 0.04
COL8A2P25067 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COL8A2P25067 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COL8A2P25067 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COL8A2P25067 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
COL8A2P25067 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COL8A2P25067 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.3■□□□□ 0.04
COL8A2P25067 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
COL8A2P25067 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.3■□□□□ 0.04
COL8A2P25067 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.3■□□□□ 0.04
COL8A2P25067 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
COL8A2P25067 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.3■□□□□ 0.04
COL8A2P25067 KRT17P6-201ENST00000453795 1220 ntBASIC15.3■□□□□ 0.04
COL8A2P25067 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
COL8A2P25067 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COL8A2P25067 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.3■□□□□ 0.04
COL8A2P25067 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
COL8A2P25067 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
COL8A2P25067 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
COL8A2P25067 AL133373.2-201ENST00000623187 2828 ntBASIC15.3■□□□□ 0.04
COL8A2P25067 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms