Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC130P13994 AP002414.4-201ENST00000589764 1148 ntBASIC19.21■□□□□ 0.67
CCDC130P13994 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CCDC130P13994 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC130P13994 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
CCDC130P13994 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC130P13994 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.21■□□□□ 0.67
CCDC130P13994 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC130P13994 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC130P13994 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC130P13994 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CCDC130P13994 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC130P13994 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC130P13994 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC130P13994 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC130P13994 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC130P13994 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC130P13994 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC130P13994 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC130P13994 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CCDC130P13994 ATP5G2P1-201ENST00000433580 426 ntBASIC19.2■□□□□ 0.66
CCDC130P13994 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.2■□□□□ 0.66
CCDC130P13994 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC130P13994 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC130P13994 AL592071.1-201ENST00000611956 408 ntBASIC19.2■□□□□ 0.66
CCDC130P13994 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
CCDC130P13994 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC130P13994 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC130P13994 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC130P13994 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC130P13994 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC130P13994 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC130P13994 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC130P13994 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC130P13994 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC130P13994 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC130P13994 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC130P13994 AC026471.1-201ENST00000564629 3026 ntBASIC19.19■□□□□ 0.66
CCDC130P13994 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC130P13994 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC130P13994 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC130P13994 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC130P13994 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC130P13994 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC130P13994 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC130P13994 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC130P13994 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC130P13994 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC130P13994 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC130P13994 AC093010.1-201ENST00000473625 1624 ntBASIC19.19■□□□□ 0.66
CCDC130P13994 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC130P13994 NEFHP1-201ENST00000412845 2629 ntBASIC19.19■□□□□ 0.66
CCDC130P13994 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC130P13994 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC130P13994 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.19■□□□□ 0.66
CCDC130P13994 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC130P13994 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC130P13994 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.19■□□□□ 0.66
CCDC130P13994 MIR3180-1-201ENST00000580374 94 ntBASIC19.19■□□□□ 0.66
CCDC130P13994 MIR3180-3-201ENST00000584616 94 ntBASIC19.19■□□□□ 0.66
CCDC130P13994 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CCDC130P13994 IGHV3-41-201ENST00000613121 348 ntBASIC19.19■□□□□ 0.66
CCDC130P13994 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC130P13994 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.19■□□□□ 0.66
CCDC130P13994 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC130P13994 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC130P13994 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC130P13994 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC130P13994 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC130P13994 KRT18P1-202ENST00000452408 1331 ntBASIC19.19■□□□□ 0.66
CCDC130P13994 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC130P13994 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC130P13994 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC130P13994 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC130P13994 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC130P13994 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC130P13994 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC130P13994 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC130P13994 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC130P13994 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC130P13994 TSPY12P-201ENST00000421279 868 ntBASIC19.18■□□□□ 0.66
CCDC130P13994 HCG4P8-203ENST00000443049 980 ntBASIC19.18■□□□□ 0.66
CCDC130P13994 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC130P13994 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC130P13994 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC130P13994 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC130P13994 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC130P13994 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC130P13994 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
CCDC130P13994 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC130P13994 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC130P13994 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CCDC130P13994 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC130P13994 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC130P13994 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC130P13994 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC130P13994 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC130P13994 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC130P13994 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC130P13994 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms