Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL11A2P13942 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
COL11A2P13942 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
COL11A2P13942 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.09■■□□□ 1.13
COL11A2P13942 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL11A2P13942 KRT18P28-201ENST00000453838 1332 ntBASIC22.09■■□□□ 1.13
COL11A2P13942 AC006504.4-201ENST00000592118 1568 ntBASIC22.09■■□□□ 1.13
COL11A2P13942 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.09■■□□□ 1.13
COL11A2P13942 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
COL11A2P13942 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC22.09■■□□□ 1.13
COL11A2P13942 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL11A2P13942 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.09■■□□□ 1.13
COL11A2P13942 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COL11A2P13942 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
COL11A2P13942 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
COL11A2P13942 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC22.09■■□□□ 1.13
COL11A2P13942 PON3-203ENST00000427422 894 ntTSL 3 BASIC22.09■■□□□ 1.13
COL11A2P13942 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC22.09■■□□□ 1.13
COL11A2P13942 HCG4B-203ENST00000450128 991 ntBASIC22.09■■□□□ 1.13
COL11A2P13942 AC122714.2-201ENST00000502787 707 ntBASIC22.09■■□□□ 1.13
COL11A2P13942 MIR4751-201ENST00000578027 74 ntBASIC22.09■■□□□ 1.13
COL11A2P13942 MIR3197-201ENST00000582241 73 ntBASIC22.09■■□□□ 1.13
COL11A2P13942 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC22.08■■□□□ 1.13
COL11A2P13942 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
COL11A2P13942 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC22.08■■□□□ 1.13
COL11A2P13942 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
COL11A2P13942 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.08■■□□□ 1.13
COL11A2P13942 NCF1C-201ENST00000438382 1427 ntBASIC22.08■■□□□ 1.13
COL11A2P13942 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC22.08■■□□□ 1.13
COL11A2P13942 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
COL11A2P13942 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC22.08■■□□□ 1.13
COL11A2P13942 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
COL11A2P13942 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC22.08■■□□□ 1.13
COL11A2P13942 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
COL11A2P13942 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
COL11A2P13942 SNCG-201ENST00000348795 684 ntTSL 2 BASIC22.08■■□□□ 1.12
COL11A2P13942 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC22.08■■□□□ 1.12
COL11A2P13942 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC22.08■■□□□ 1.12
COL11A2P13942 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.12
COL11A2P13942 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC22.08■■□□□ 1.12
COL11A2P13942 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.12
COL11A2P13942 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC22.08■■□□□ 1.12
COL11A2P13942 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
COL11A2P13942 RIN3-211ENST00000557762 517 ntTSL 3 BASIC22.08■■□□□ 1.12
COL11A2P13942 RPL28-205ENST00000558131 444 ntTSL 5 BASIC22.08■■□□□ 1.12
COL11A2P13942 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC22.08■■□□□ 1.12
COL11A2P13942 AC005829.1-201ENST00000570002 483 ntBASIC22.08■■□□□ 1.12
COL11A2P13942 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC22.08■■□□□ 1.12
COL11A2P13942 AC005593.1-201ENST00000624894 515 ntBASIC22.08■■□□□ 1.12
COL11A2P13942 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
COL11A2P13942 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC22.08■■□□□ 1.12
COL11A2P13942 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
COL11A2P13942 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
COL11A2P13942 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
COL11A2P13942 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL11A2P13942 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
COL11A2P13942 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
COL11A2P13942 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COL11A2P13942 ANO7L1-203ENST00000602586 1720 ntBASIC22.07■■□□□ 1.12
COL11A2P13942 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL11A2P13942 IGLL3P-201ENST00000412472 434 ntBASIC22.07■■□□□ 1.12
COL11A2P13942 CNN2P11-201ENST00000429351 262 ntBASIC22.07■■□□□ 1.12
COL11A2P13942 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC22.07■■□□□ 1.12
COL11A2P13942 SPCS2P1-201ENST00000561636 679 ntBASIC22.07■■□□□ 1.12
COL11A2P13942 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC22.07■■□□□ 1.12
COL11A2P13942 AC010507.1-201ENST00000633895 436 ntBASIC22.07■■□□□ 1.12
COL11A2P13942 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL11A2P13942 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL11A2P13942 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
COL11A2P13942 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
COL11A2P13942 GPR89P-201ENST00000407924 1495 ntBASIC22.07■■□□□ 1.12
COL11A2P13942 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL11A2P13942 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COL11A2P13942 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
COL11A2P13942 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC22.07■■□□□ 1.12
COL11A2P13942 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL11A2P13942 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL11A2P13942 ELL2P1-201ENST00000413990 1906 ntBASIC22.06■■□□□ 1.12
COL11A2P13942 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL11A2P13942 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC22.06■■□□□ 1.12
COL11A2P13942 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL11A2P13942 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL11A2P13942 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL11A2P13942 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC22.06■■□□□ 1.12
COL11A2P13942 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC22.06■■□□□ 1.12
COL11A2P13942 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC22.06■■□□□ 1.12
COL11A2P13942 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC22.06■■□□□ 1.12
COL11A2P13942 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC22.06■■□□□ 1.12
COL11A2P13942 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC22.06■■□□□ 1.12
COL11A2P13942 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC22.06■■□□□ 1.12
COL11A2P13942 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL11A2P13942 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL11A2P13942 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL11A2P13942 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL11A2P13942 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL11A2P13942 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL11A2P13942 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
COL11A2P13942 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC22.06■■□□□ 1.12
COL11A2P13942 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC22.06■■□□□ 1.12
COL11A2P13942 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms