Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 DNAJB3-201ENST00000446806 729 ntBASIC24■■□□□ 1.43
CSB-PGBD3P0DP91 AC112698.1-201ENST00000510299 916 ntBASIC24■■□□□ 1.43
CSB-PGBD3P0DP91 RNA5SP416-201ENST00000516838 111 ntBASIC24■■□□□ 1.43
CSB-PGBD3P0DP91 MSRA-206ENST00000521209 814 ntTSL 3 BASIC24■■□□□ 1.43
CSB-PGBD3P0DP91 RNF151-202ENST00000569210 853 ntTSL 2 BASIC24■■□□□ 1.43
CSB-PGBD3P0DP91 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC24■■□□□ 1.43
CSB-PGBD3P0DP91 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CSB-PGBD3P0DP91 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC24■■□□□ 1.43
CSB-PGBD3P0DP91 CLDN5-201ENST00000403084 2357 ntBASIC24■■□□□ 1.43
CSB-PGBD3P0DP91 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CSB-PGBD3P0DP91 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
CSB-PGBD3P0DP91 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CSB-PGBD3P0DP91 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CSB-PGBD3P0DP91 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CSB-PGBD3P0DP91 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CSB-PGBD3P0DP91 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CSB-PGBD3P0DP91 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CSB-PGBD3P0DP91 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CSB-PGBD3P0DP91 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CSB-PGBD3P0DP91 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CSB-PGBD3P0DP91 SRP19-202ENST00000445150 833 ntTSL 2 BASIC23.99■■□□□ 1.43
CSB-PGBD3P0DP91 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CSB-PGBD3P0DP91 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
CSB-PGBD3P0DP91 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CSB-PGBD3P0DP91 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
CSB-PGBD3P0DP91 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC23.99■■□□□ 1.43
CSB-PGBD3P0DP91 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.99■■□□□ 1.43
CSB-PGBD3P0DP91 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CSB-PGBD3P0DP91 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CSB-PGBD3P0DP91 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CSB-PGBD3P0DP91 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.99■■□□□ 1.43
CSB-PGBD3P0DP91 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CSB-PGBD3P0DP91 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CSB-PGBD3P0DP91 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CSB-PGBD3P0DP91 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.99■■□□□ 1.43
CSB-PGBD3P0DP91 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
CSB-PGBD3P0DP91 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC23.98■■□□□ 1.43
CSB-PGBD3P0DP91 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.98■■□□□ 1.43
CSB-PGBD3P0DP91 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC23.98■■□□□ 1.43
CSB-PGBD3P0DP91 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CSB-PGBD3P0DP91 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CSB-PGBD3P0DP91 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CSB-PGBD3P0DP91 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CSB-PGBD3P0DP91 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC23.98■■□□□ 1.43
CSB-PGBD3P0DP91 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
CSB-PGBD3P0DP91 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CSB-PGBD3P0DP91 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC23.98■■□□□ 1.43
CSB-PGBD3P0DP91 AL355385.1-201ENST00000606123 409 ntBASIC23.98■■□□□ 1.43
CSB-PGBD3P0DP91 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CSB-PGBD3P0DP91 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC23.98■■□□□ 1.43
CSB-PGBD3P0DP91 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC23.98■■□□□ 1.43
CSB-PGBD3P0DP91 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC23.98■■□□□ 1.43
CSB-PGBD3P0DP91 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CSB-PGBD3P0DP91 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CSB-PGBD3P0DP91 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC23.98■■□□□ 1.43
CSB-PGBD3P0DP91 USP39-202ENST00000409025 1946 ntTSL 5 BASIC23.98■■□□□ 1.43
CSB-PGBD3P0DP91 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.98■■□□□ 1.43
CSB-PGBD3P0DP91 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CSB-PGBD3P0DP91 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CSB-PGBD3P0DP91 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CSB-PGBD3P0DP91 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CSB-PGBD3P0DP91 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CSB-PGBD3P0DP91 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CSB-PGBD3P0DP91 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CSB-PGBD3P0DP91 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
CSB-PGBD3P0DP91 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CSB-PGBD3P0DP91 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CSB-PGBD3P0DP91 CTNS-203ENST00000399306 803 ntTSL 3 BASIC23.97■■□□□ 1.43
CSB-PGBD3P0DP91 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC23.97■■□□□ 1.43
CSB-PGBD3P0DP91 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CSB-PGBD3P0DP91 AC004967.1-201ENST00000453589 447 ntBASIC23.97■■□□□ 1.43
CSB-PGBD3P0DP91 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CSB-PGBD3P0DP91 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
CSB-PGBD3P0DP91 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC23.97■■□□□ 1.43
CSB-PGBD3P0DP91 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CSB-PGBD3P0DP91 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
CSB-PGBD3P0DP91 AC079781.4-201ENST00000641908 219 ntBASIC23.97■■□□□ 1.43
CSB-PGBD3P0DP91 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.97■■□□□ 1.43
CSB-PGBD3P0DP91 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CSB-PGBD3P0DP91 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CSB-PGBD3P0DP91 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CSB-PGBD3P0DP91 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC23.96■■□□□ 1.43
CSB-PGBD3P0DP91 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CSB-PGBD3P0DP91 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC23.96■■□□□ 1.43
CSB-PGBD3P0DP91 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CSB-PGBD3P0DP91 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CSB-PGBD3P0DP91 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
CSB-PGBD3P0DP91 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CSB-PGBD3P0DP91 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC23.96■■□□□ 1.43
CSB-PGBD3P0DP91 BX005266.1-201ENST00000473402 457 ntBASIC23.96■■□□□ 1.43
CSB-PGBD3P0DP91 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CSB-PGBD3P0DP91 RPS29-206ENST00000557111 488 ntTSL 2 BASIC23.96■■□□□ 1.43
CSB-PGBD3P0DP91 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC23.96■■□□□ 1.43
CSB-PGBD3P0DP91 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC23.96■■□□□ 1.43
CSB-PGBD3P0DP91 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC23.96■■□□□ 1.43
CSB-PGBD3P0DP91 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CSB-PGBD3P0DP91 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
CSB-PGBD3P0DP91 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC23.95■■□□□ 1.43
CSB-PGBD3P0DP91 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CSB-PGBD3P0DP91 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms