Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.9■□□□□ 0.3
HNRNPCL4P0DMR1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.89■□□□□ 0.3
HNRNPCL4P0DMR1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 AL024508.2-201ENST00000607749 1894 ntBASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 NAPSB-206ENST00000562112 1266 ntBASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 OR6D1P-202ENST00000641007 5290 ntBASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
HNRNPCL4P0DMR1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 FZD10-202ENST00000539839 3282 ntBASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 INGX-201ENST00000359239 846 ntBASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HNRNPCL4P0DMR1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 CYP2D8P-201ENST00000433633 1490 ntBASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 KRT18P55-202ENST00000578578 1546 ntBASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 MMP23A-201ENST00000234610 1017 ntBASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 AC010947.1-201ENST00000623454 693 ntBASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HNRNPCL4P0DMR1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms