Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC172P0C7W6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 GNAS-203ENST00000306120 1878 ntBASIC19.65■□□□□ 0.74
CCDC172P0C7W6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 TSPY14P-201ENST00000303979 915 ntBASIC19.65■□□□□ 0.74
CCDC172P0C7W6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 EGLN1P1-201ENST00000531623 762 ntBASIC19.65■□□□□ 0.74
CCDC172P0C7W6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC172P0C7W6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC172P0C7W6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC172P0C7W6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC172P0C7W6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC172P0C7W6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC172P0C7W6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC172P0C7W6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC172P0C7W6 AL512604.3-201ENST00000569583 964 ntBASIC19.64■□□□□ 0.73
CCDC172P0C7W6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC172P0C7W6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC172P0C7W6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC172P0C7W6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC172P0C7W6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC172P0C7W6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC172P0C7W6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC172P0C7W6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC172P0C7W6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC172P0C7W6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
CCDC172P0C7W6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC172P0C7W6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC172P0C7W6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC172P0C7W6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC172P0C7W6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC172P0C7W6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC172P0C7W6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 AL390955.1-201ENST00000428694 934 ntBASIC19.63■□□□□ 0.73
CCDC172P0C7W6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC172P0C7W6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms