Protein–RNA interactions for Protein: P0C7M3

SFTA3, Surfactant-associated protein 3, humanhuman

Predictions only

Length 94 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTA3P0C7M3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 AC116351.2-201ENST00000606540 1585 ntBASIC14.56□□□□□ -0.08
SFTA3P0C7M3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 AC016769.1-201ENST00000409132 1010 ntBASIC14.56□□□□□ -0.08
SFTA3P0C7M3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 MYC-208ENST00000641036 567 ntBASIC14.56□□□□□ -0.08
SFTA3P0C7M3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.56□□□□□ -0.08
SFTA3P0C7M3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 ANKRD20A6P-201ENST00000618763 204 ntBASIC14.55□□□□□ -0.08
SFTA3P0C7M3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 AC010536.3-201ENST00000620306 533 ntBASIC14.55□□□□□ -0.08
SFTA3P0C7M3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
SFTA3P0C7M3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFTA3P0C7M3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.54□□□□□ -0.08
SFTA3P0C7M3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFTA3P0C7M3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFTA3P0C7M3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SFTA3P0C7M3 AL136379.1-201ENST00000623471 2642 ntBASIC14.54□□□□□ -0.08
SFTA3P0C7M3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFTA3P0C7M3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFTA3P0C7M3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFTA3P0C7M3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFTA3P0C7M3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SFTA3P0C7M3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.54□□□□□ -0.08
SFTA3P0C7M3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFTA3P0C7M3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFTA3P0C7M3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFTA3P0C7M3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.54□□□□□ -0.08
SFTA3P0C7M3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC14.54□□□□□ -0.08
SFTA3P0C7M3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.54□□□□□ -0.08
SFTA3P0C7M3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
SFTA3P0C7M3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SFTA3P0C7M3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SFTA3P0C7M3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SFTA3P0C7M3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFTA3P0C7M3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SFTA3P0C7M3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SFTA3P0C7M3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms