Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DPB1P04440 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 AC106820.2-201ENST00000563775 3264 ntBASIC16.35■□□□□ 0.21
HLA-DPB1P04440 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DPB1P04440 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 MYLKP1-201ENST00000509077 1580 ntBASIC16.34■□□□□ 0.21
HLA-DPB1P04440 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 TSPY7P-201ENST00000431358 1114 ntBASIC16.34■□□□□ 0.21
HLA-DPB1P04440 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 AC124067.4-201ENST00000519691 2379 ntBASIC16.34■□□□□ 0.21
HLA-DPB1P04440 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DPB1P04440 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DPB1P04440 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DPB1P04440 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.33■□□□□ 0.21
HLA-DPB1P04440 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
HLA-DPB1P04440 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
HLA-DPB1P04440 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DPB1P04440 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.33■□□□□ 0.21
HLA-DPB1P04440 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DPB1P04440 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DPB1P04440 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 AC080080.1-201ENST00000625121 2420 ntBASIC16.33■□□□□ 0.2
HLA-DPB1P04440 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 AC011506.1-201ENST00000474329 610 ntBASIC16.33■□□□□ 0.2
HLA-DPB1P04440 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-DPB1P04440 AC011298.2-201ENST00000617989 482 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms