Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04436 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04436 AC233702.3-201ENST00000578656 1387 ntBASIC16.57■□□□□ 0.24
P04436 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04436 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04436 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.57■□□□□ 0.24
P04436 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.57■□□□□ 0.24
P04436 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.57■□□□□ 0.24
P04436 AC074051.2-201ENST00000565115 352 ntBASIC16.57■□□□□ 0.24
P04436 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.57■□□□□ 0.24
P04436 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04436 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04436 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04436 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
P04436 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P04436 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
P04436 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
P04436 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
P04436 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.57■□□□□ 0.24
P04436 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04436 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04436 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04436 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
P04436 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04436 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04436 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04436 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04436 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.56■□□□□ 0.24
P04436 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04436 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
P04436 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
P04436 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04436 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04436 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
P04436 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04436 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04436 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04436 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04436 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04436 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
P04436 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04436 AL450487.1-201ENST00000426799 995 ntBASIC16.56■□□□□ 0.24
P04436 DUSP5P1-201ENST00000441325 1139 ntBASIC16.56■□□□□ 0.24
P04436 NUS1P1-201ENST00000446295 882 ntBASIC16.56■□□□□ 0.24
P04436 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
P04436 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
P04436 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.56■□□□□ 0.24
P04436 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.56■□□□□ 0.24
P04436 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.56■□□□□ 0.24
P04436 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04436 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.56■□□□□ 0.24
P04436 AC012313.10-201ENST00000623509 926 ntBASIC16.56■□□□□ 0.24
P04436 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.56■□□□□ 0.24
P04436 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.56■□□□□ 0.24
P04436 TNXA-203ENST00000507684 2038 ntBASIC16.56■□□□□ 0.24
P04436 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
P04436 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04436 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
P04436 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04436 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04436 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.56■□□□□ 0.24
P04436 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
P04436 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P04436 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
P04436 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.56■□□□□ 0.24
P04436 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04436 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04436 PKD1P1-201ENST00000458669 6805 ntBASIC16.55■□□□□ 0.24
P04436 ESPNP-201ENST00000270691 2015 ntBASIC16.55■□□□□ 0.24
P04436 LINC00167-201ENST00000530583 1419 ntBASIC16.55■□□□□ 0.24
P04436 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.55■□□□□ 0.24
P04436 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.55■□□□□ 0.24
P04436 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
P04436 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
P04436 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
P04436 AC246785.2-201ENST00000432512 513 ntBASIC16.55■□□□□ 0.24
P04436 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04436 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.55■□□□□ 0.24
P04436 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.55■□□□□ 0.24
P04436 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
P04436 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
P04436 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
P04436 AC009154.2-201ENST00000621177 724 ntBASIC16.55■□□□□ 0.24
P04436 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
P04436 AL691432.3-201ENST00000621860 400 ntBASIC16.55■□□□□ 0.24
P04436 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04436 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
P04436 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
P04436 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.55■□□□□ 0.24
P04436 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04436 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
P04436 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04436 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
P04436 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
P04436 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.54■□□□□ 0.24
P04436 WIZP1-201ENST00000531444 2299 ntBASIC16.54■□□□□ 0.24
P04436 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04436 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.54■□□□□ 0.24
P04436 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04436 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms