Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRGV3P03979 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRGV3P03979 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.31□□□□□ -0.12
TRGV3P03979 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRGV3P03979 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRGV3P03979 AC112907.2-201ENST00000448639 330 ntBASIC14.31□□□□□ -0.12
TRGV3P03979 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRGV3P03979 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.31□□□□□ -0.12
TRGV3P03979 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.31□□□□□ -0.12
TRGV3P03979 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.31□□□□□ -0.12
TRGV3P03979 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TRGV3P03979 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRGV3P03979 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRGV3P03979 LETM1P2-201ENST00000597330 2178 ntBASIC14.31□□□□□ -0.12
TRGV3P03979 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.31□□□□□ -0.12
TRGV3P03979 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.31□□□□□ -0.12
TRGV3P03979 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRGV3P03979 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRGV3P03979 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRGV3P03979 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRGV3P03979 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRGV3P03979 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRGV3P03979 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRGV3P03979 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.31□□□□□ -0.12
TRGV3P03979 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRGV3P03979 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRGV3P03979 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRGV3P03979 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.3□□□□□ -0.12
TRGV3P03979 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRGV3P03979 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.3□□□□□ -0.12
TRGV3P03979 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.3□□□□□ -0.12
TRGV3P03979 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.3□□□□□ -0.12
TRGV3P03979 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.3□□□□□ -0.12
TRGV3P03979 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.3□□□□□ -0.12
TRGV3P03979 PVRIG2P-201ENST00000435460 978 ntBASIC14.3□□□□□ -0.12
TRGV3P03979 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.3□□□□□ -0.12
TRGV3P03979 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
TRGV3P03979 AL136038.4-201ENST00000603606 1261 ntBASIC14.3□□□□□ -0.12
TRGV3P03979 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.3□□□□□ -0.12
TRGV3P03979 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.3□□□□□ -0.12
TRGV3P03979 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.3□□□□□ -0.12
TRGV3P03979 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRGV3P03979 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.3□□□□□ -0.12
TRGV3P03979 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRGV3P03979 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.3□□□□□ -0.12
TRGV3P03979 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRGV3P03979 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.3□□□□□ -0.12
TRGV3P03979 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
TRGV3P03979 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRGV3P03979 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.29□□□□□ -0.12
TRGV3P03979 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV3P03979 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.29□□□□□ -0.12
TRGV3P03979 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV3P03979 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV3P03979 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV3P03979 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TRGV3P03979 CROCCP1-201ENST00000426910 5675 ntBASIC14.29□□□□□ -0.12
TRGV3P03979 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.29□□□□□ -0.12
TRGV3P03979 AC009113.1-201ENST00000570267 2443 ntBASIC14.29□□□□□ -0.12
TRGV3P03979 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV3P03979 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV3P03979 KRT18P38-201ENST00000449496 1282 ntBASIC14.29□□□□□ -0.12
TRGV3P03979 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.29□□□□□ -0.12
TRGV3P03979 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV3P03979 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV3P03979 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV3P03979 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.29□□□□□ -0.12
TRGV3P03979 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.29□□□□□ -0.12
TRGV3P03979 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.29□□□□□ -0.12
TRGV3P03979 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.29□□□□□ -0.12
TRGV3P03979 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.29□□□□□ -0.12
TRGV3P03979 AL590326.2-201ENST00000625139 305 ntBASIC14.29□□□□□ -0.12
TRGV3P03979 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.29□□□□□ -0.12
TRGV3P03979 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRGV3P03979 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV3P03979 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms