Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.62■□□□□ 0.41
KRT6AP02538 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT6AP02538 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.62■□□□□ 0.41
KRT6AP02538 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
KRT6AP02538 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KRT6AP02538 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
KRT6AP02538 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT6AP02538 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.62■□□□□ 0.41
KRT6AP02538 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KRT6AP02538 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KRT6AP02538 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT6AP02538 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.61■□□□□ 0.41
KRT6AP02538 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT6AP02538 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT6AP02538 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT6AP02538 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KRT6AP02538 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT6AP02538 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KRT6AP02538 NAPSB-206ENST00000562112 1266 ntBASIC17.61■□□□□ 0.41
KRT6AP02538 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.61■□□□□ 0.41
KRT6AP02538 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT6AP02538 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.61■□□□□ 0.41
KRT6AP02538 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
KRT6AP02538 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KRT6AP02538 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT6AP02538 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KRT6AP02538 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
KRT6AP02538 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
KRT6AP02538 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
KRT6AP02538 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.6■□□□□ 0.41
KRT6AP02538 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
KRT6AP02538 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.6■□□□□ 0.41
KRT6AP02538 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.6■□□□□ 0.41
KRT6AP02538 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.6■□□□□ 0.41
KRT6AP02538 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.6■□□□□ 0.41
KRT6AP02538 AC010240.3-201ENST00000607688 395 ntBASIC17.6■□□□□ 0.41
KRT6AP02538 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 AC093010.1-201ENST00000473625 1624 ntBASIC17.6■□□□□ 0.41
KRT6AP02538 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
KRT6AP02538 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
KRT6AP02538 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
KRT6AP02538 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.6■□□□□ 0.41
KRT6AP02538 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT6AP02538 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6AP02538 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6AP02538 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
KRT6AP02538 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.59■□□□□ 0.41
KRT6AP02538 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.59■□□□□ 0.41
KRT6AP02538 AC134043.2-201ENST00000624206 2238 ntBASIC17.59■□□□□ 0.41
KRT6AP02538 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6AP02538 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6AP02538 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
KRT6AP02538 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.59■□□□□ 0.41
KRT6AP02538 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.59■□□□□ 0.41
KRT6AP02538 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6AP02538 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6AP02538 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6AP02538 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.59■□□□□ 0.41
KRT6AP02538 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6AP02538 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6AP02538 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.59■□□□□ 0.41
KRT6AP02538 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
KRT6AP02538 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6AP02538 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6AP02538 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.59■□□□□ 0.41
KRT6AP02538 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.59■□□□□ 0.41
KRT6AP02538 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.59■□□□□ 0.41
KRT6AP02538 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6AP02538 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6AP02538 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
KRT6AP02538 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6AP02538 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6AP02538 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6AP02538 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6AP02538 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6AP02538 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT6AP02538 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms