Protein–RNA interactions for Protein: O95777

LSM8, U6 snRNA-associated Sm-like protein LSm8, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8O95777 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.16■□□□□ 0.66
LSM8O95777 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSM8O95777 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSM8O95777 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSM8O95777 RCN1P1-201ENST00000400413 996 ntBASIC19.16■□□□□ 0.66
LSM8O95777 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.16■□□□□ 0.66
LSM8O95777 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.16■□□□□ 0.66
LSM8O95777 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LSM8O95777 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LSM8O95777 AC092647.4-201ENST00000457211 535 ntBASIC19.16■□□□□ 0.66
LSM8O95777 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.16■□□□□ 0.66
LSM8O95777 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.16■□□□□ 0.66
LSM8O95777 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LSM8O95777 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
LSM8O95777 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LSM8O95777 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSM8O95777 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSM8O95777 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSM8O95777 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSM8O95777 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSM8O95777 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LSM8O95777 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
LSM8O95777 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSM8O95777 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.15■□□□□ 0.66
LSM8O95777 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LSM8O95777 LINC00602-201ENST00000629776 2065 ntBASIC19.15■□□□□ 0.66
LSM8O95777 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSM8O95777 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
LSM8O95777 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSM8O95777 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSM8O95777 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
LSM8O95777 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
LSM8O95777 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LSM8O95777 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSM8O95777 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSM8O95777 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LSM8O95777 KRT18P48-201ENST00000434763 852 ntBASIC19.15■□□□□ 0.66
LSM8O95777 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LSM8O95777 AC104076.2-201ENST00000448912 469 ntBASIC19.15■□□□□ 0.66
LSM8O95777 KRT18P38-201ENST00000449496 1282 ntBASIC19.15■□□□□ 0.66
LSM8O95777 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LSM8O95777 AC092597.1-201ENST00000487352 616 ntBASIC19.15■□□□□ 0.66
LSM8O95777 AC063952.2-201ENST00000498792 1227 ntBASIC19.15■□□□□ 0.66
LSM8O95777 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.15■□□□□ 0.66
LSM8O95777 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSM8O95777 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.15■□□□□ 0.66
LSM8O95777 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.15■□□□□ 0.66
LSM8O95777 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.15■□□□□ 0.66
LSM8O95777 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.15■□□□□ 0.66
LSM8O95777 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LSM8O95777 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
LSM8O95777 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.15■□□□□ 0.66
LSM8O95777 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.15■□□□□ 0.66
LSM8O95777 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSM8O95777 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSM8O95777 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LSM8O95777 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LSM8O95777 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LSM8O95777 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LSM8O95777 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
LSM8O95777 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LSM8O95777 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
LSM8O95777 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.14■□□□□ 0.65
LSM8O95777 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM8O95777 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM8O95777 HBZP1-201ENST00000354915 429 ntBASIC19.14■□□□□ 0.65
LSM8O95777 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM8O95777 AL359075.1-203ENST00000462729 1002 ntBASIC19.14■□□□□ 0.65
LSM8O95777 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.14■□□□□ 0.65
LSM8O95777 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.14■□□□□ 0.65
LSM8O95777 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.14■□□□□ 0.65
LSM8O95777 RN7SL850P-201ENST00000579959 291 ntBASIC19.14■□□□□ 0.65
LSM8O95777 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LSM8O95777 AC022898.2-201ENST00000616822 1312 ntBASIC19.14■□□□□ 0.65
LSM8O95777 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
LSM8O95777 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LSM8O95777 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LSM8O95777 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM8O95777 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
LSM8O95777 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LSM8O95777 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.14■□□□□ 0.65
LSM8O95777 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LSM8O95777 AL133373.2-201ENST00000623187 2828 ntBASIC19.14■□□□□ 0.65
LSM8O95777 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LSM8O95777 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LSM8O95777 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LSM8O95777 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSM8O95777 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LSM8O95777 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.13■□□□□ 0.65
LSM8O95777 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSM8O95777 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSM8O95777 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LSM8O95777 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LSM8O95777 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSM8O95777 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSM8O95777 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSM8O95777 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSM8O95777 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSM8O95777 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSM8O95777 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms