Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC13.21□□□□□ -0.29
TNFRSF6BO95407 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC13.21□□□□□ -0.29
TNFRSF6BO95407 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNFRSF6BO95407 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TNFRSF6BO95407 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNFRSF6BO95407 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TNFRSF6BO95407 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TNFRSF6BO95407 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TNFRSF6BO95407 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNFRSF6BO95407 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TNFRSF6BO95407 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TNFRSF6BO95407 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TNFRSF6BO95407 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TNFRSF6BO95407 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TNFRSF6BO95407 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
TNFRSF6BO95407 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.21□□□□□ -0.3
TNFRSF6BO95407 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TNFRSF6BO95407 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TNFRSF6BO95407 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.21□□□□□ -0.3
TNFRSF6BO95407 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 KRT18P55-202ENST00000578578 1546 ntBASIC13.2□□□□□ -0.3
TNFRSF6BO95407 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 MIR638-201ENST00000385237 100 ntBASIC13.2□□□□□ -0.3
TNFRSF6BO95407 METTL26-203ENST00000397664 604 ntTSL 2 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 POU5F1P3-201ENST00000428824 1078 ntBASIC13.2□□□□□ -0.3
TNFRSF6BO95407 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 KRT18P41-201ENST00000518924 1277 ntBASIC13.2□□□□□ -0.3
TNFRSF6BO95407 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 REXO2-208ENST00000539754 791 ntTSL 2 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 AC120498.8-201ENST00000614275 531 ntBASIC13.2□□□□□ -0.3
TNFRSF6BO95407 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNFRSF6BO95407 AC092368.3-202ENST00000574180 1591 ntBASIC13.2□□□□□ -0.3
TNFRSF6BO95407 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TNFRSF6BO95407 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TNFRSF6BO95407 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TNFRSF6BO95407 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
TNFRSF6BO95407 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TNFRSF6BO95407 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
TNFRSF6BO95407 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TNFRSF6BO95407 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TNFRSF6BO95407 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TNFRSF6BO95407 RCC2P3-201ENST00000418112 1537 ntBASIC13.19□□□□□ -0.3
TNFRSF6BO95407 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TNFRSF6BO95407 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC13.19□□□□□ -0.3
TNFRSF6BO95407 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TNFRSF6BO95407 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TNFRSF6BO95407 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TNFRSF6BO95407 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.19□□□□□ -0.3
TNFRSF6BO95407 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TNFRSF6BO95407 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms