Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.36■□□□□ 0.37
LCMT2O60294 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LCMT2O60294 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LCMT2O60294 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LCMT2O60294 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LCMT2O60294 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LCMT2O60294 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LCMT2O60294 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LCMT2O60294 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.36■□□□□ 0.37
LCMT2O60294 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.36■□□□□ 0.37
LCMT2O60294 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.36■□□□□ 0.37
LCMT2O60294 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.36■□□□□ 0.37
LCMT2O60294 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.36■□□□□ 0.37
LCMT2O60294 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.36■□□□□ 0.37
LCMT2O60294 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.36■□□□□ 0.37
LCMT2O60294 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.36■□□□□ 0.37
LCMT2O60294 AC008687.5-201ENST00000593746 558 ntBASIC17.36■□□□□ 0.37
LCMT2O60294 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
LCMT2O60294 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.36■□□□□ 0.37
LCMT2O60294 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LCMT2O60294 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.36■□□□□ 0.37
LCMT2O60294 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
LCMT2O60294 LINC00167-201ENST00000530583 1419 ntBASIC17.36■□□□□ 0.37
LCMT2O60294 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LCMT2O60294 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.36■□□□□ 0.37
LCMT2O60294 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LCMT2O60294 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LCMT2O60294 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
LCMT2O60294 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LCMT2O60294 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
LCMT2O60294 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LCMT2O60294 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LCMT2O60294 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LCMT2O60294 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LCMT2O60294 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LCMT2O60294 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.35■□□□□ 0.37
LCMT2O60294 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LCMT2O60294 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LCMT2O60294 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LCMT2O60294 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LCMT2O60294 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.35■□□□□ 0.37
LCMT2O60294 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LCMT2O60294 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LCMT2O60294 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LCMT2O60294 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LCMT2O60294 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LCMT2O60294 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LCMT2O60294 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LCMT2O60294 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LCMT2O60294 PCED1CP-201ENST00000419887 785 ntBASIC17.35■□□□□ 0.37
LCMT2O60294 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.35■□□□□ 0.37
LCMT2O60294 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.35■□□□□ 0.37
LCMT2O60294 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.35■□□□□ 0.37
LCMT2O60294 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.35■□□□□ 0.37
LCMT2O60294 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LCMT2O60294 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.35■□□□□ 0.37
LCMT2O60294 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
LCMT2O60294 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.35■□□□□ 0.37
LCMT2O60294 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LCMT2O60294 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LCMT2O60294 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.35■□□□□ 0.37
LCMT2O60294 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.35■□□□□ 0.37
LCMT2O60294 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LCMT2O60294 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.35■□□□□ 0.37
LCMT2O60294 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
LCMT2O60294 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LCMT2O60294 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LCMT2O60294 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.35■□□□□ 0.37
LCMT2O60294 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LCMT2O60294 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LCMT2O60294 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LCMT2O60294 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.35■□□□□ 0.37
LCMT2O60294 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LCMT2O60294 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LCMT2O60294 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LCMT2O60294 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LCMT2O60294 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
LCMT2O60294 AC026471.1-201ENST00000564629 3026 ntBASIC17.34■□□□□ 0.37
LCMT2O60294 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCMT2O60294 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCMT2O60294 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCMT2O60294 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
LCMT2O60294 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LCMT2O60294 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCMT2O60294 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LCMT2O60294 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LCMT2O60294 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LCMT2O60294 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LCMT2O60294 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LCMT2O60294 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.34■□□□□ 0.37
LCMT2O60294 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.34■□□□□ 0.37
LCMT2O60294 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.34■□□□□ 0.37
LCMT2O60294 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.34■□□□□ 0.37
LCMT2O60294 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.34■□□□□ 0.37
LCMT2O60294 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.34■□□□□ 0.37
LCMT2O60294 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.34■□□□□ 0.37
LCMT2O60294 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LCMT2O60294 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.34■□□□□ 0.37
LCMT2O60294 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.34■□□□□ 0.37
LCMT2O60294 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms