Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AP002383.4-201ENST00000442518 975 ntBASIC16.9■□□□□ 0.3
PRKNO60260 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.9■□□□□ 0.3
PRKNO60260 BX276092.5-203ENST00000456199 560 ntBASIC16.9■□□□□ 0.3
PRKNO60260 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRKNO60260 KRT8P26-201ENST00000534154 1276 ntBASIC16.9■□□□□ 0.3
PRKNO60260 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.9■□□□□ 0.3
PRKNO60260 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.9■□□□□ 0.3
PRKNO60260 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.9■□□□□ 0.3
PRKNO60260 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.9■□□□□ 0.3
PRKNO60260 NPAP1P7-201ENST00000613027 823 ntBASIC16.9■□□□□ 0.3
PRKNO60260 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PRKNO60260 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRKNO60260 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRKNO60260 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRKNO60260 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRKNO60260 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRKNO60260 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PRKNO60260 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRKNO60260 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRKNO60260 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRKNO60260 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.9■□□□□ 0.3
PRKNO60260 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PRKNO60260 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PRKNO60260 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.9■□□□□ 0.3
PRKNO60260 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRKNO60260 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRKNO60260 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRKNO60260 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRKNO60260 GMCL1P1-201ENST00000463439 1581 ntBASIC16.89■□□□□ 0.3
PRKNO60260 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.89■□□□□ 0.3
PRKNO60260 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PRKNO60260 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
PRKNO60260 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PRKNO60260 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.89■□□□□ 0.29
PRKNO60260 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRKNO60260 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRKNO60260 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRKNO60260 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.89■□□□□ 0.29
PRKNO60260 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRKNO60260 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRKNO60260 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.89■□□□□ 0.29
PRKNO60260 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.89■□□□□ 0.29
PRKNO60260 TSSC2-201ENST00000450217 709 ntBASIC16.89■□□□□ 0.29
PRKNO60260 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.89■□□□□ 0.29
PRKNO60260 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.89■□□□□ 0.29
PRKNO60260 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.89■□□□□ 0.29
PRKNO60260 GPR32P1-201ENST00000601788 811 ntBASIC16.89■□□□□ 0.29
PRKNO60260 AL121672.3-201ENST00000608644 468 ntBASIC16.89■□□□□ 0.29
PRKNO60260 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.89■□□□□ 0.29
PRKNO60260 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.89■□□□□ 0.29
PRKNO60260 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRKNO60260 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRKNO60260 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRKNO60260 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.89■□□□□ 0.29
PRKNO60260 PHGDH-209ENST00000641074 1780 ntBASIC16.89■□□□□ 0.29
PRKNO60260 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRKNO60260 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRKNO60260 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.89■□□□□ 0.29
PRKNO60260 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.89■□□□□ 0.29
PRKNO60260 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRKNO60260 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRKNO60260 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRKNO60260 KRT89P-201ENST00000620027 1478 ntBASIC16.88■□□□□ 0.29
PRKNO60260 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.88■□□□□ 0.29
PRKNO60260 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.88■□□□□ 0.29
PRKNO60260 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PRKNO60260 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.88■□□□□ 0.29
PRKNO60260 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRKNO60260 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.88■□□□□ 0.29
PRKNO60260 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.88■□□□□ 0.29
PRKNO60260 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.88■□□□□ 0.29
PRKNO60260 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PRKNO60260 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PRKNO60260 AC092119.3-201ENST00000612618 583 ntBASIC16.88■□□□□ 0.29
PRKNO60260 AC004263.2-201ENST00000617183 678 ntBASIC16.88■□□□□ 0.29
PRKNO60260 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.88■□□□□ 0.29
PRKNO60260 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.88■□□□□ 0.29
PRKNO60260 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRKNO60260 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRKNO60260 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.88■□□□□ 0.29
PRKNO60260 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PRKNO60260 FZD10-202ENST00000539839 3282 ntBASIC16.88■□□□□ 0.29
PRKNO60260 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRKNO60260 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRKNO60260 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRKNO60260 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRKNO60260 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.87■□□□□ 0.29
PRKNO60260 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.87■□□□□ 0.29
PRKNO60260 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKNO60260 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.87■□□□□ 0.29
PRKNO60260 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKNO60260 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PRKNO60260 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PRKNO60260 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.87■□□□□ 0.29
PRKNO60260 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKNO60260 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKNO60260 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKNO60260 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRKNO60260 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKNO60260 ATP5G2P1-201ENST00000433580 426 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms